RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 PLP2Q04941 152 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 TUSC1Q2TAM9 212 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 PDZD9Q8IXQ8 264 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 TMEM178AQ8NBL3 297 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 Q8NFD4 153 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 EXTL1Q92935 676 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 CYTL1Q9NRR1 136 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 CST4P01036 141 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 CA6P23280 308 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 S100A10P60903 97 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 STK11Q15831 433 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 ALKBH6Q3KRA9 238 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 NSUN5P2Q63ZY6 315 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 C2orf50Q96LR7 162 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 PTPRBP23467 1997 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 AADACP22760 399 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 HOXA4Q00056 320 aaPredicted RBP12.55□□□□□ -0.4
RFTN1-203ENST00000432519 C20orf204Q6ZNR8 217 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 SLC30A7Q8NEW0 376 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 OR5L1Q8NGL2 311 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 PIK3IP1Q96FE7 263 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 TECTBQ96PL2 329 aa12.55□□□□□ -0.4
RFTN1-203ENST00000432519 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 SCTP09683 121 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 SELEP16581 610 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 IGHV1-2P23083 117 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 APLNRP35414 380 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-203ENST00000432519 ELP2Q6IA86 826 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 SGPP2Q8IWX5 399 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-203ENST00000432519 OR5P3Q8WZ94 311 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 MS4A7Q9GZW8 240 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-203ENST00000432519 GP6Q9HCN6 339 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 SLC2A9Q9NRM0 540 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
RFTN1-203ENST00000432519 FGF12P61328 243 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
RFTN1-203ENST00000432519 GGNBP1Q5YKI7 109 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 OR2A2Q6IF42 318 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 PRSS54Q6PEW0 395 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 TRIB1Q96RU8 372 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 ZNF286AQ9HBT8 521 aa12.54□□□□□ -0.4
RFTN1-203ENST00000432519 PTPRZ1P23471 2315 aaPredicted RBP12.53□□□□□ -0.4
RFTN1-203ENST00000432519 A8MXK9 166 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 FGF2P09038 288 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 IDH3GP51553 393 aaPredicted RBP12.53□□□□□ -0.4
RFTN1-203ENST00000432519 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
RFTN1-203ENST00000432519 LHFPL5Q8TAF8 219 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 MED9Q9NWA0 146 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 ZNF14P17017 642 aaPredicted RBP12.53□□□□□ -0.4
RFTN1-203ENST00000432519 PRKACAP17612 351 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 SNTB1Q13884 538 aaKnown RBP12.53□□□□□ -0.4
RFTN1-203ENST00000432519 TMEM187Q14656 261 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 CLEC9AQ6UXN8 241 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 TFAP2EQ6VUC0 442 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 BVESQ8NE79 360 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 OR5T2Q8NGG2 359 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 C1orf123Q9NWV4 160 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
RFTN1-203ENST00000432519 LYL1P12980 280 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 TMEM211Q6ICI0 200 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 P4HA3Q7Z4N8 544 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 OR2J1Q9GZK6 312 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 HS3ST1O14792 307 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 BET1O15155 118 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 NAPSAO96009 420 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 FOXF2Q12947 444 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 DEFB109BQ30KR1 87 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 VWA1Q6PCB0 445 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 TMED6Q8WW62 240 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 RDH5Q92781 318 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 MOB3AQ96BX8 217 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 NAA60Q9H7X0 242 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 OR2S2Q9NQN1 319 aa12.52□□□□□ -0.41
RFTN1-203ENST00000432519 CADP27708 2225 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 TRAPPC2LH3BP13 241 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 PPYP01298 95 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 SMUG1Q53HV7 270 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 PAN3Q58A45 887 aaKnown RBP12.51□□□□□ -0.41
RFTN1-203ENST00000432519 CNEP1R1Q8N9A8 125 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
RFTN1-203ENST00000432519 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
RFTN1-203ENST00000432519 PIEZO2Q9H5I5 2752 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 TRAV39A0A0B4J263 110 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms