RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ANGPTL6Q8NI99 470 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF431Q8TF32 576 aaPredicted RBP8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 OR51I2Q9H344 312 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 DYNLRB1Q9NP97 96 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 DIABLOQ9NR28 239 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 SLC7A11Q9UPY5 501 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 SPEF1Q9Y4P9 236 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 TMEM235A6NFC5 223 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 GABARAPH6UMI1 98 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 HS3ST1O14792 307 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 PTBP3O95758 552 aaKnown RBP8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 MT-ND4P03905 459 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 PPP3CBP16298 524 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 MGMTP16455 207 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 COL8A2P25067 703 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 CD80P33681 288 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 MNDAP41218 407 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 PRB3Q04118 309 aaPredicted RBP8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 RSU1Q15404 277 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 PLAC9Q5JTB6 97 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZBTB37Q5TC79 503 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 FAM53AQ6NSI3 398 aaPredicted RBP8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 NUP37Q8NFH4 326 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 GIMAP1Q8WWP7 306 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 AQP3Q92482 292 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 SORCS2Q96PQ0 1159 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 HIST1H2AAQ96QV6 131 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 MRI1Q9BV20 369 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 GCM1Q9NP62 436 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 NGBQ9NPG2 151 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF230Q9UIE0 474 aaPredicted RBP8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 ZNF222Q9UK12 451 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 MGAT4AQ9UM21 535 aa8.03□□□□□ -1.12
HMGCLL1-206ENST00000428842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 M0R233 179 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 ECDO95905 644 aaPredicted RBP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 PRKACAP17612 351 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR3A3P47888 321 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 FUT6P51993 359 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 P2RX3P56373 397 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 TNFAIP6P98066 277 aaPredicted RBP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 WDR82Q6UXN9 313 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 CSNK2A3Q8NEV1 391 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR13G1Q8NGZ3 307 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 FBXW5Q969U6 566 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 LRRC46Q96FV0 321 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 TMEM204Q9BSN7 226 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 C20orf85Q9H1P6 137 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 HEXA-AS1Q9H8Q6 139 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 KCNK7Q9Y2U2 307 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 TRAV18A0A075B6X5 111 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 UBE2QL1A1L167 161 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 NAP1L6A6NFF2 107 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 CTAG2O75638 210 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 DANCRP0C864 163 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 AGAP20933 346 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 APOBEC3AP31941 199 aaPredicted RBP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 PTH2RP49190 550 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 TMEM50BP56557 158 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 CNN3Q15417 329 aaKnown RBP8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 C1orf100Q5SVJ3 147 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 AVPI1Q5T686 147 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 Q6ZPA2 131 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 GVQW1Q8N7I0 195 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 CHST4Q8NCG5 386 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR6M1Q8NGM8 313 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 RDH5Q92781 318 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 LPAR5Q9H1C0 372 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 HRASLSQ9HDD0 168 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 DLL4Q9NR61 685 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 KLK11Q9UBX7 282 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 ST3GAL6Q9Y274 331 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 U3KQ87 197 aa8.02□□□□□ -1.13
HMGCLL1-206ENST00000428842 LINC00862A6NCI5 91 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 POM121CA8CG34 1229 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 C17orf100A8MU93 164 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 SIRPB1O00241 398 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 PRAF2O60831 178 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 PEX14O75381 377 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR7C1O76099 320 aaPredicted RBP8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 TPPPO94811 219 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 ATP1B3P54709 279 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 DLX1P56177 255 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 GNG3P63215 75 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 MRPS10P82664 201 aaKnown RBP8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 DNM1P46Q6ZS02 220 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 GCSAMQ8N6F7 178 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR5A2Q8NGI9 324 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR51T1Q8NGJ9 327 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 OR52I2Q8NH67 350 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 LRRC29Q8WV35 223 aa8.01□□□□□ -1.13
HMGCLL1-206ENST00000428842 C17orf50Q8WW18 174 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms