RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RPUSD1Q9UJJ7 312 aaKnown RBP12.06□□□□□ -0.48
SGCE-204ENST00000428696 ST3GAL6Q9Y274 331 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 YLPM1P49750 1951 aaKnown RBP12.06□□□□□ -0.48
SGCE-204ENST00000428696 MALRD1Q5VYJ5 2156 aa12.06□□□□□ -0.48
SGCE-204ENST00000428696 SONP18583 2426 aaKnown RBP12.05□□□□□ -0.48
SGCE-204ENST00000428696 TMEM82A0PJX8 343 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 A8MXK9 166 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 GPR37O15354 613 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 ZNF780AO75290 641 aaPredicted RBP12.05□□□□□ -0.48
SGCE-204ENST00000428696 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
SGCE-204ENST00000428696 HTR2CP28335 458 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 LSM3P62310 102 aaKnown RBP12.05□□□□□ -0.48
SGCE-204ENST00000428696 RPL31P62899 125 aaKnown RBP12.05□□□□□ -0.48
SGCE-204ENST00000428696 ZNF146Q15072 292 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 RAB11BQ15907 218 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 ATAD3CQ5T2N8 411 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 HES5Q5TA89 166 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 PPP1R35Q8TAP8 253 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 SNX22Q96L94 193 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 PPA2Q9H2U2 334 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 V9GY05 133 aa12.05□□□□□ -0.48
SGCE-204ENST00000428696 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 A0A0G2JK05 382 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 J3QLI3 93 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 K7N7A8 449 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 MPIG6BO95866 241 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 AVPP01185 164 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 LIPFP07098 398 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 PSMD7P51665 324 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 CAV3P56539 151 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 CLDN12P56749 244 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 OR10A3P58181 314 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 MXD1Q05195 221 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 TAF9Q16594 264 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 ELP2Q6IA86 826 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 OR10K2Q6IF99 312 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 CD200R1LQ6Q8B3 271 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 BPIFB2Q8N4F0 458 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 OR4S1Q8NGB4 309 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 OR5D13Q8NGL4 314 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 TBC1D15Q8TC07 691 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 DCTN5Q9BTE1 182 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 RNF167Q9H6Y7 350 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
SGCE-204ENST00000428696 ABCA2Q9BZC7 2435 aa12.04□□□□□ -0.48
SGCE-204ENST00000428696 TRAV1-2A0A0B4J238 106 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 PSPNO60542 156 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 TOX4O94842 621 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 SRD5A1P18405 259 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 RAB3BP20337 219 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 GALP22466 123 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 PRB3Q04118 309 aaPredicted RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 PAN3Q58A45 887 aaKnown RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 METTL11BQ5VVY1 283 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 OR8H2Q8N162 312 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 OR6M1Q8NGM8 313 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 NEK7Q8TDX7 302 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 KCTD7Q96MP8 289 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 GFI1Q99684 422 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 MRPS26Q9BYN8 205 aaKnown RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 FAM234AQ9H0X4 552 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 C19orf12Q9NSK7 152 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 LPAR3Q9UBY5 353 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 NIPBLQ6KC79 2804 aaeCLIP12.03□□□□□ -0.48
SGCE-204ENST00000428696 AIREO43918 545 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 CRLF1O75462 422 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 SMIM18P0DKX4 95 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 ARSBP15848 533 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 MGMTP16455 207 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 JUNBP17275 347 aaPredicted RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 PAX2Q02962 417 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 PAX8Q06710 450 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 AESQ08117 197 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 BLMHQ13867 455 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
SGCE-204ENST00000428696 TIMM50Q3ZCQ8 353 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 C1orf100Q5SVJ3 147 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 TMEM200BQ69YZ2 307 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 Q6P435 159 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 C17orf107Q6ZR85 190 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 TRAPPC6BQ86SZ2 158 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 PDZD9Q8IXQ8 264 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 CMTM4Q8IZR5 234 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 NANPQ8TBE9 248 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 CENPOQ9BU64 300 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 CST11Q9H112 138 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 IL36GQ9NZH8 169 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
SGCE-204ENST00000428696 GHRLQ9UBU3 117 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms