RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 PTBP3O95758 552 aaKnown RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ETFDHQ16134 617 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 SPINK14Q6IE38 97 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 PPP1R1CQ8WVI7 109 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ABHD14AQ9BUJ0 271 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ZNF552Q9H707 407 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 SLC17A5Q9NRA2 495 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 C20orf141Q9NUB4 165 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 SIRT5Q9NXA8 310 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 INSIG2Q9Y5U4 225 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 VDAC1P21796 283 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GALNSP34059 522 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GPR6P46095 362 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GALR1P47211 349 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 CLPPQ16740 277 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 Q6ZN92 141 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 SLC25A42Q86VD7 318 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 SEC11CQ9BY50 192 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 MMP25Q9NPA2 562 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 FLVCR2Q9UPI3 526 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GPX5O75715 221 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 TFAP2AP05549 437 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 HOXC4P09017 264 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 GUCA2BQ16661 112 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 MOGAT3Q86VF5 341 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 C20orf196Q8IYI0 205 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 FGF20Q9NP95 211 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 TECRQ9NZ01 308 aaKnown RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 CLN8Q9UBY8 286 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 C16orf97H3BN30 126 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 TO15178 435 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 RER1O15258 196 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 FABP5Q01469 135 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 CEBPEQ15744 281 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ZBTB37Q5TC79 503 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 HSD17B13Q7Z5P4 300 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 OR4C5Q8NGB2 326 aa7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 LYRM2Q9NU23 88 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-208ENST00000428599 ARID1BQ8NFD5 2236 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 KIAA1324LA8MWY0 1029 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 CCL2P13500 99 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 SPINK9Q5DT21 86 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 EBLN2Q6P2I7 272 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ZNF561Q8N587 486 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 PRDM14Q9GZV8 571 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 CACNG5Q9UF02 275 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ATG2BQ96BY7 2078 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 PDCD6O75340 191 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 GP1BAP07359 652 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 HIST1H1DP16402 221 aaKnown RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 RPS4Y1P22090 263 aaKnown RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 LOXL3P58215 753 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ISL1P61371 349 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 HIST1H3AP68431 136 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ZNF658BQ4V348 819 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 TMEM179BQ7Z7N9 219 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 OR8I2Q8N0Y5 310 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 MUC20Q8N307 709 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ZDHHC22Q8N966 263 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 EID2BQ96D98 161 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 LPAR2Q9HBW0 351 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ASCL3Q9NQ33 180 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 PLEKHB1Q9UF11 243 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ZMIZ1Q9ULJ6 1067 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 MEX3AA1L020 520 aaKnown RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 DCTDP32321 178 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 TAGLNQ01995 201 aaKnown RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 RIGQ13278 110 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 TMEM241Q24JQ0 296 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 GGNBP1Q5YKI7 109 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ZNF547Q8IVP9 402 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 R3HDM4Q96D70 268 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 AUNIPQ9H7T9 357 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 A0A0B4J2E0 115 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 A0A1B0GX12 115 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 MAP1LC3B2A6NCE7 125 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 FCN1O00602 326 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 RNF224P0DH78 156 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 RAB9AP51151 201 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 C19orf57Q0VDD7 668 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 COL13A1Q5TAT6 717 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-208ENST00000428599 SLC35E4Q6ICL7 350 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 TCTEX1D1Q8N7M0 179 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 LINC01555Q8NAE3 123 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 ARHGAP5-AS1Q96IT6 56 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 MAP1LC3BQ9GZQ8 125 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 KCNK15Q9H427 330 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 NTMQ9P121 344 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 U3KQ87 197 aa7.92□□□□□ -1.14
CTNND1-208ENST00000428599 SPINK4O60575 86 aa7.91□□□□□ -1.14
CTNND1-208ENST00000428599 CTSVO60911 334 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms