RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SNCAP37840 140 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 UBE2KP61086 200 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 PLA2G7Q13093 441 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 OR52W1Q6IF63 320 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 SECTM1Q8WVN6 248 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 TSPAN32Q96QS1 320 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 SUCNR1Q9BXA5 334 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 HEATR1Q9H583 2144 aaKnown RBP9.33□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF816-ZNF321PA0A0X1KG74 233 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 AQP7P3A6NL99 342 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 K7EPK0 472 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 HAX1O00165 279 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 CHATP28329 748 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 SERPINF1P36955 418 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 HNF4GQ14541 408 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 CEBPEQ15744 281 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 TAF9Q16594 264 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 C11orf87Q6NUJ2 197 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 FAM71E2Q8N5Q1 922 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 HSD17B11Q8NBQ5 300 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 DMBX1Q8NFW5 382 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 OR5T1Q8NG75 326 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 OR6X1Q8NH79 312 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 PCGF1Q9BSM1 259 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 GHRLQ9UBU3 117 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 LRRK2Q5S007 2527 aa9.33□□□□□ -0.92
TCOF1-204ENST00000427724 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ANGPTL7O43827 346 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SMIM10L1P0DMW3 83 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 DAOP14920 347 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 GNB3P16520 340 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF17P17021 662 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 G0S2P27469 103 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 PSMB6P28072 239 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 Q6ZRG5 221 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 MOGAT3Q86VF5 341 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SMIM10Q96HG1 83 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 CMTM3Q96MX0 182 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 PBOV1Q9GZY1 135 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 HIPK2Q9H2X6 1198 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 TAF9BQ9HBM6 251 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF286AQ9HBT8 521 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 LRP12Q9Y561 859 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 KPTNQ9Y664 436 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 A0A1W2PRS3 328 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 FAM221AA4D161 298 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 GSTZ1O43708 216 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ALOX5APP20292 161 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 HRH1P35367 487 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SLC25A1P53007 311 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 SCGB2A2Q13296 93 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF239Q16600 458 aaKnown RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 PCK2Q16822 640 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF660Q6AZW8 331 aaPredicted RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 NKAIN3Q8N8D7 197 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 FAM213BQ8TBF2 198 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 UNKLQ9H9P5 680 aaKnown RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 CLN8Q9UBY8 286 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 NCBP2LA6PVI3 153 aaKnown RBP9.32□□□□□ -0.92
TCOF1-204ENST00000427724 YIF1AO95070 293 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 NGFRP08138 427 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 GNG3P63215 75 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 DCAF12L2Q5VW00 463 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 VWA1Q6PCB0 445 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 UQCC3Q6UW78 93 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 RFESDQ8TAC1 157 aa9.32□□□□□ -0.92
TCOF1-204ENST00000427724 PLXNA3P51805 1871 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF705FA8MVS1 300 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 PHOX2AO14813 284 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF705DP0CH99 300 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ZNF705BP0CI00 300 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 DEFA4P12838 97 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 DRAM2Q6UX65 266 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 PIP4P1Q86T03 277 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ATG4DQ86TL0 474 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-204ENST00000427724 SLC25A40Q8TBP6 338 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 MARCH1Q8TCQ1 289 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 ADIPOR1Q96A54 375 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 NICN1Q9BSH3 213 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 KLHDC2Q9Y2U9 406 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 MMP24Q9Y5R2 645 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 R4GMQ9 66 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 RNASEK-C17orf49H0YIS7 233 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 CTDSPLO15194 276 aa9.31□□□□□ -0.92
TCOF1-204ENST00000427724 OR2C1O95371 312 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms