RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 U3KQK5 164 aa9.79□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TRBV2A0A0J9YWF9 115 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 A0A1B0GTI1 187 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 METTL15A6NJ78 407 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 C3orf84H3BNL1 204 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 BUB1B-PAK6H3BSN5 160 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ATP8B1O43520 1251 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF44P15621 663 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF20P17024 532 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CD24P25063 80 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PTGFRP43088 359 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR3A4PP47883 348 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 POU3F4P49335 361 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 THBS3P49746 956 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 KRTAP10-11P60412 298 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF91Q05481 1191 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MFGE8Q08431 387 aaPredicted RBP9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF146Q15072 292 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PTGES3Q15185 160 aaKnown RBP9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TMEM244Q5VVB8 128 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 PLEKHG7Q6ZR37 379 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 LHFPL2Q6ZUX7 228 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MRPL41Q8IXM3 137 aaKnown RBP9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 LINC00482Q8N8I6 264 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CHST4Q8NCG5 386 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR4P4Q8NGL7 312 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 COPS3Q9UNS2 423 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 GSTK1Q9Y2Q3 226 aa9.78□□□□□ -0.84
HLA-DQB3-203ENST00000425319 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SIRPB1O00241 398 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SULT1C4O75897 302 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RPSAP08865 295 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR2T7P0C7T2 308 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 UBCP0CG48 685 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CCL1P22362 96 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 NFYBP25208 207 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SNU13P55769 128 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RAB25P57735 213 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RPL23AP62750 156 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MS4A2Q01362 244 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 DOC2BQ14184 412 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 UBE2V2Q15819 145 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HLA-DRB5Q30154 266 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 KRBOX4Q5JUW0 171 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 Q6ZSR3 168 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SPATA24Q86W54 205 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 KLHL30-AS1Q8NEE0 82 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR52N4Q8NGI2 321 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR9G1Q8NH87 305 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HAVCR2Q8TDQ0 301 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CANT1Q8WVQ1 401 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TOMM40LQ969M1 308 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CCDC124Q96CT7 223 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 BARHL1Q9BZE3 327 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CHST5Q9GZS9 411 aa9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 WARS2Q9UGM6 360 aaKnown RBP9.77□□□□□ -0.85
HLA-DQB3-203ENST00000425319 DEGS1O15121 323 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SRSF10O75494 262 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IGHA1P01876 353 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TMEM11P17152 192 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 DUSP1P28562 367 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CD34P28906 385 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RAB7AP51149 207 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 GNGT1P63211 74 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 LDLRAD2Q5SZI1 272 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PRAMEF5Q5TYX0 476 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 KCTD20Q7Z5Y7 419 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SLC35E3Q7Z769 313 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ZNF695Q8IW36 515 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TCEANCQ8N8B7 351 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 OR5M8Q8NGP6 311 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TMEM163Q8TC26 289 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 TFAP2CQ92754 450 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RFKQ969G6 155 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SPSB1Q96BD6 273 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MRPL48Q96GC5 212 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 THTPAQ9BU02 230 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MRM2Q9UI43 246 aaKnown RBP9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 HHLA2Q9UM44 414 aa9.76□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CCDC182A6NF36 153 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 FGF16O43320 207 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 RRP9O43818 475 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PSPNO60542 156 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 IGLV1-47P01700 117 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CCDC159P0C7I6 412 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 DBTP11182 482 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 JUNBP17275 347 aaPredicted RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 ATF1P18846 271 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 BCL3P20749 454 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 AESQ08117 197 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 PDZK1IP1Q13113 114 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 MADCAM1Q13477 382 aa9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 CXorf66Q5JRM2 361 aaPredicted RBP9.75□□□□□ -0.85
HLA-DQB3-203ENST00000425319 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms