RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 MICBQ29980 383 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 SMIM21Q3B7S5 101 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 Q8TCH9 128 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 BPESC1Q9GZL8 116 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 ZNF230Q9UIE0 474 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-202ENST00000424478 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 MAB21L2Q9Y586 359 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 DEGS1O15121 323 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 PRDX2P32119 198 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 TAS2R20P59543 309 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 EDDM3AQ14507 147 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 Q6P435 159 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 OR2W3Q7Z3T1 314 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 LRRC28Q86X40 367 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-202ENST00000424478 OR10R2Q8NGX6 335 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 PHF21AQ96BD5 680 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 CSPG4Q6UVK1 2322 aa11.23□□□□□ -0.61
PRPF39-202ENST00000424478 HLA-DQB1P01920 261 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 BTG1P62324 171 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CDNFQ49AH0 187 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 ELP2Q6IA86 826 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CCDC190Q86UF4 302 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-202ENST00000424478 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 TSC22D3Q99576 134 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 URM1Q9BTM9 101 aaKnown RBP11.22□□□□□ -0.61
PRPF39-202ENST00000424478 ABCG5Q9H222 651 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 NPTNQ9Y639 398 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 YLPM1P49750 1951 aaKnown RBP11.22□□□□□ -0.61
PRPF39-202ENST00000424478 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM82A0PJX8 343 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-202ENST00000424478 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CPT2P23786 658 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 SUMF2Q8NBJ7 301 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 ANGPTL6Q8NI99 470 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 METTL21EPA6NDL7 271 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 GOSR1O95249 250 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 DGCR2P98153 550 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 LSAMPQ13449 338 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 GPR176Q14439 515 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 Q6ZTK2 550 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 OR4S1Q8NGB4 309 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 CCDC107Q8WV48 283 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 PECRQ9BY49 303 aa11.22□□□□□ -0.61
PRPF39-202ENST00000424478 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 CLDN25C9JDP6 229 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 SLC33A1O00400 549 aaPredicted RBP11.21□□□□□ -0.61
PRPF39-202ENST00000424478 ADAM20O43506 726 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 LANCL1O43813 399 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 RAB6AP20340 208 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 CAPZA1P52907 286 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 AESQ08117 197 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 Q6ZPA2 131 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 TMEM185AQ8NFB2 350 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 PLPPR1Q8TBJ4 325 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 HPS1Q92902 700 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 TM2D1Q9BX74 207 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 AKIP1Q9NQ31 210 aa11.21□□□□□ -0.61
PRPF39-202ENST00000424478 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.62
PRPF39-202ENST00000424478 CD3GP09693 182 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 CHATP28329 748 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 PYDC2Q56P42 97 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 PAN3Q58A45 887 aaKnown RBP11.21□□□□□ -0.62
PRPF39-202ENST00000424478 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 STUMQ69YW2 141 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 C17orf107Q6ZR85 190 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 Q8NFD4 153 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 OR10Z1Q8NGY1 313 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 AK3Q9UIJ7 227 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF222Q9UK12 451 aa11.21□□□□□ -0.62
PRPF39-202ENST00000424478 CFHR2P36980 270 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 TALDO1P37837 337 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 ERVFRD-1P60508 538 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 PRB3Q04118 309 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF146Q15072 292 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 OR4K15Q8NH41 348 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 ERGIC1Q969X5 290 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 GAFA1Q96PS6 74 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 NEDD4LQ96PU5 975 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 LGALS8O00214 317 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 PHF1O43189 567 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 XRCC3O43542 346 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 IL2RGP31785 369 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 Q8IYB0 196 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms