RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RRADP55042 308 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 ID3Q02535 119 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 SNAI3Q3KNW1 292 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 SLC22A25Q6T423 547 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 SAXO1Q8IYX7 474 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-204ENST00000424143 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 ULBP2Q9BZM5 246 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 WDR54Q9H977 334 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 TMEM242Q9NWH2 141 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 PARPBPQ9NWS1 579 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 RARRES3Q9UL19 164 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 SLC7A11Q9UPY5 501 aa13.18□□□□□ -0.3
C9orf3-204ENST00000424143 A0A1W2PPE2 198 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 RPL36A-HNRNPH2H7BZ11 118 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PHF1O43189 567 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 XRCC2O43543 280 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 NRASP01111 189 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 CTXN2P0C2S0 81 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 SRFP11831 508 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 CBR1P16152 277 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PPP1CCP36873 323 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 FHITP49789 147 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 CLDN15P56746 228 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 RAC1P63000 192 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 IL24Q13007 206 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 RNPS1Q15287 305 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 TMEM182Q6ZP80 229 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 SLC35G3Q8N808 338 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 HSD17B11Q8NBQ5 300 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 MR1Q95460 341 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 TVP23CQ96ET8 276 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF385AQ96PM9 386 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 SH2D2AQ9NP31 389 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 UNC13CQ8NB66 2214 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 H3BQ15 152 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 SCRG1O75711 98 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PPYP01298 95 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 ARG1P05089 322 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 DAOP14920 347 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 LIFP15018 202 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 KLK2P20151 261 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 AADACP22760 399 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 RBM11P57052 281 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 PHLDA2Q53GA4 152 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 DPPA2Q7Z7J5 298 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 TMEM252Q8N6L7 170 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 GTF3AQ92664 365 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 SPSB4Q96A44 273 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
C9orf3-204ENST00000424143 RBM24Q9BX46 236 aaKnown RBP13.17□□□□□ -0.3
C9orf3-204ENST00000424143 IGSF23A1L1A6 192 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 ZIC3O60481 467 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 SLC34A2O95436 690 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 OPN1LWP04000 364 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 DBHP09172 617 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 OR13C7P0DN81 318 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 UCP1P25874 307 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 GLIPR1P48060 266 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 PCBD1P61457 104 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 TLE4Q04727 773 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 KIAA0141Q14154 515 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-204ENST00000424143 NRN1LQ496H8 165 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 RIPPLY2Q5TAB7 128 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF574Q6ZN55 896 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-204ENST00000424143 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
C9orf3-204ENST00000424143 DEFB119Q8N690 84 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 TP53RKQ96S44 253 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 TMEM38BQ9NVV0 291 aa13.16□□□□□ -0.3
C9orf3-204ENST00000424143 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.3
C9orf3-204ENST00000424143 TRAV20A0A0B4J274 112 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 NKX2-6A6NCS4 301 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ZNF724A8MTY0 619 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
C9orf3-204ENST00000424143 TXNL1O43396 289 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 ANGPTL7O43827 346 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 TUSC2O75896 110 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 C1QL1O75973 258 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
C9orf3-204ENST00000424143 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 VDAC1P21796 283 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 FXYD4P59646 89 aa13.15□□□□□ -0.3
C9orf3-204ENST00000424143 RAC3P60763 192 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms