RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 YPEL4Q96NS1 127 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 GPHA2Q96T91 129 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 TOLLIPQ9H0E2 274 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 TMPRSS5Q9H3S3 457 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 BORCS7-ASMTA0A0B4J1R7 106 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 A0A1W2PNV4 684 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 CXCL1P09341 107 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 RSPO1Q2MKA7 263 aaPredicted RBP12.45□□□□□ -0.42
MSH5-206ENST00000423982 PLPPR5Q32ZL2 321 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 SOHLH1Q5JUK2 328 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 GFI1BQ5VTD9 330 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 ZNF385CQ66K41 422 aaPredicted RBP12.45□□□□□ -0.42
MSH5-206ENST00000423982 FBXW12Q6X9E4 464 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 PIP4P1Q86T03 277 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 ZFP62Q8NB50 900 aaPredicted RBP12.45□□□□□ -0.42
MSH5-206ENST00000423982 OR10G3Q8NGC4 313 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 OR2AE1Q8NHA4 323 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 PIGQQ9BRB3 760 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 PPP4R1LQ9P1A2 415 aa12.45□□□□□ -0.42
MSH5-206ENST00000423982 H0YL77 283 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 H7C1Q1 480 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 LMO1P25800 156 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 ZNF41P51814 821 aaPredicted RBP12.44□□□□□ -0.42
MSH5-206ENST00000423982 RHEBQ15382 184 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 ABCA11PQ4W5N1 156 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
MSH5-206ENST00000423982 RHOVQ96L33 236 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 PFDN5Q99471 154 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 FAM24AA6NFZ4 105 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 C9orf172C9J069 976 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 GPR137BO60478 399 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 ZNF728P0DKX0 622 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 CLDN17P56750 224 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 RAB2AP61019 212 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 SPNS3Q6ZMD2 512 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
MSH5-206ENST00000423982 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
MSH5-206ENST00000423982 NSG1A0A0A6YYJ2 146 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 IGHV3-15A0A0B4J1V0 119 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 NXPH3O95157 252 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 ONECUT2O95948 504 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 TMEM176BQ3YBM2 270 aaPredicted RBP12.43□□□□□ -0.42
MSH5-206ENST00000423982 TIPARPQ7Z3E1 657 aaKnown RBP12.43□□□□□ -0.42
MSH5-206ENST00000423982 ZNF383Q8NA42 475 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 MUCL1Q96DR8 90 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 MALSU1Q96EH3 234 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 SLC2A9Q9NRM0 540 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 DOK5Q9P104 306 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 TRBV11-1A0A0K0K1C0 115 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 K7N7A8 449 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 IFNA17P01571 189 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 Q8WTZ3 238 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 HAS2Q92819 552 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 RAB39BQ96DA2 213 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 Q96M66 194 aa12.43□□□□□ -0.42
MSH5-206ENST00000423982 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
MSH5-206ENST00000423982 DHRS3O75911 302 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 TNFSF15O95150 251 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 CHATP28329 748 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 PIGYQ3MUY2 71 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 SLC16A14Q7RTX9 510 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 SDHAF3Q9NRP4 125 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 KCNIP3Q9Y2W7 256 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 LIPGQ9Y5X9 500 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 MGAQ8IWI9 3026 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 IGKV1-27A0A075B6S5 117 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 TGIF2-C20orf24A0A0A6YYL0 155 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 ZNF726A6NNF4 738 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 H3BQ15 152 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 PHF1O43189 567 aaPredicted RBP12.42□□□□□ -0.42
MSH5-206ENST00000423982 TCN2P20062 427 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 HOXA5P20719 270 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 MTCP1P56278 107 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 ERVFRD-1P60508 538 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 EWSR1Q01844 656 aaKnown RBP eCLIP12.42□□□□□ -0.42
MSH5-206ENST00000423982 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 COMMD1Q8N668 190 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 SLC35G3Q8N808 338 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 MSI2Q96DH6 328 aaKnown RBP12.42□□□□□ -0.42
MSH5-206ENST00000423982 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
MSH5-206ENST00000423982 CHST5Q9GZS9 411 aa12.42□□□□□ -0.42
MSH5-206ENST00000423982 C9J4A7 227 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
MSH5-206ENST00000423982 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
MSH5-206ENST00000423982 PTGDSP41222 190 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 ALDH3B1P43353 468 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 SPSB3Q6PJ21 355 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 SLC22A25Q6T423 547 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 Q6ZPA2 131 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
MSH5-206ENST00000423982 OR6X1Q8NH79 312 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms