RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SUCNR1Q9BXA5 334 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 SPACA1Q9HBV2 294 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 TIMM10BQ9Y5J6 103 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CCL2P13500 99 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CBR1P16152 277 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CCNOP22674 350 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 DUSP1P28562 367 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 OTX2P32243 289 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 Q0VFX4 171 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 DMBX1Q8NFW5 382 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 HPSE2Q8WWQ2 592 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 NTNG2Q96CW9 530 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 DIDO1Q9BTC0 2240 aaKnown RBP13.64□□□□□ -0.23
CDH1-202ENST00000422392 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 FBXO7Q9Y3I1 522 aa13.64□□□□□ -0.23
CDH1-202ENST00000422392 HSPB6O14558 160 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 GPR137BO60478 399 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 PDCD6O75340 191 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 P04436 131 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 P2RY1P47900 373 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 RBM11P57052 281 aaKnown RBP13.63□□□□□ -0.23
CDH1-202ENST00000422392 HERV-K104P61576 105 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 MALLQ13021 153 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 TMEM182Q6ZP80 229 aaPredicted RBP13.63□□□□□ -0.23
CDH1-202ENST00000422392 CPEB3Q8NE35 698 aaKnown RBP13.63□□□□□ -0.23
CDH1-202ENST00000422392 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
CDH1-202ENST00000422392 SFT2D1Q8WV19 159 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 SMCO4Q9NRQ5 59 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 DEPPQ9NTK1 212 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 SLC7A11Q9UPY5 501 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 ZDBF2Q9HCK1 2354 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 BORCS7-ASMTA0A0B4J1R7 106 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 CCDC163A0A0D9SF12 145 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 GJE1A6NN92 205 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 M0R036 132 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 NXPH3O95157 252 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 OMGP23515 440 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 CLINT1Q14677 625 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 LGI3Q8N145 548 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 KPTNQ9Y664 436 aa13.63□□□□□ -0.23
CDH1-202ENST00000422392 NKX2-6A6NCS4 301 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 FAM24AA6NFZ4 105 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 ST8SIA3O43173 380 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 PPYP01298 95 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 SEC11BP0C7V7 166 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 SRD5A2P31213 254 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 PPP1CCP36873 323 aaKnown RBP13.62□□□□□ -0.23
CDH1-202ENST00000422392 FOLR3P41439 243 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 FUT6P51993 359 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 PMS2CLQ68D20 193 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 C19orf12Q9NSK7 152 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 LUZP4Q9P127 313 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 NBEAQ8NFP9 2946 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 C7orf77A4D0Y5 90 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 PINLYPA6NC86 204 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 C3orf80F5H4A9 247 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 CYC1P08574 325 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 GLP1RP43220 463 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
CDH1-202ENST00000422392 SYT3Q9BQG1 590 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 MAGT1Q9H0U3 335 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 RGCCQ9H4X1 137 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
CDH1-202ENST00000422392 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 A0A096LPE4 126 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 LRRC3CA6NJW4 275 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 EIF3GO75821 320 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-202ENST00000422392 GLAP06280 429 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 ZNF44P15621 663 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 POLR2GP62487 172 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-202ENST00000422392 KRTAP27-1Q3LI81 207 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 KRBOX4Q5JUW0 171 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 SPIN3Q5JUX0 258 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 FAM213BQ8TBF2 198 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 ABHD14AQ9BUJ0 271 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 C3orf85A0A1B0GTC6 90 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 A0A1W2PPH5 198 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 A6NLC8 198 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 GPR37O15354 613 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 OR13C7P0DN81 318 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 BCL3P20749 454 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 FUT3P21217 361 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 EWSR1Q01844 656 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-202ENST00000422392 OR8B8Q15620 311 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 SLAMF9Q96A28 289 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
CDH1-202ENST00000422392 PCSK5Q92824 1860 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 ZNF816-ZNF321PA0A0X1KG74 233 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms