RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 OR8B8Q15620 311 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 FAM209BQ5JX69 171 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 ZNF585AQ6P3V2 769 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 LHFPL1Q86WI0 220 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 ZDHHC23Q8IYP9 409 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 PRR18Q8N4B5 295 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 PIEZO2Q9H5I5 2752 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 ZFHX4Q86UP3 3567 aa9.43□□□□□ -0.9
DDX56-203ENST00000421223 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 CD300LBA8K4G0 201 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 TRAPPC2LH3BP13 241 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 PDCD6O75340 191 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 CELA3BP08861 270 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 FUT3P21217 361 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 RBM11P57052 281 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 HERV-K104P61576 105 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 CYCSP99999 105 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 ZNF124Q15973 351 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 MDP1Q86V88 176 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 MDS2Q8NDY4 140 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 CCDC54Q8NEL0 328 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 EXTL1Q92935 676 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 MRPL24Q96A35 216 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 APOBEC3DQ96AK3 386 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 IP6K3Q96PC2 410 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 USB1Q9BQ65 265 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 SHARPINQ9H0F6 387 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 ZNF286AQ9HBT8 521 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 ASF1BQ9NVP2 202 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 CADP27708 2225 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 DIRAS3O95661 229 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 APOC3P02656 99 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 OR5AC1P0C628 307 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 SELEP16581 610 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 UBA52P62987 128 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 RELQ04864 619 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 Q3ZCU0 254 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 TMEM42Q69YG0 159 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 TMEM178AQ8NBL3 297 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 PXT1Q8NFP0 134 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 SECTM1Q8WVN6 248 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 RTN4IP1Q8WWV3 396 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 PRDM14Q9GZV8 571 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 ROS1P08922 2347 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 ANKRD30BLA7E2S9 258 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 IFNA21P01568 189 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 GLP1RP43220 463 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 RNPS1Q15287 305 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 MKXQ8IYA7 352 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 EIF4E3Q8N5X7 224 aaKnown RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 ZFP62Q8NB50 900 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 HPSE2Q8WWQ2 592 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 WDYHV1Q96HA8 205 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 FGF23Q9GZV9 251 aaPredicted RBP9.42□□□□□ -0.9
DDX56-203ENST00000421223 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
DDX56-203ENST00000421223 MED12LQ86YW9 2145 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 GLAP06280 429 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 SLC25A4P12235 298 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ARR3P36575 388 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ERVS71-1P61550 626 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 RTL6Q6ICC9 239 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 HSD17B13Q7Z5P4 300 aaPredicted RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 STPG2Q8N412 459 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 BVESQ8NE79 360 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 SLC30A7Q8NEW0 376 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 C2orf50Q96LR7 162 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 LINC00470Q9BZP3 86 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 PARP12Q9H0J9 701 aaKnown RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 C1orf123Q9NWV4 160 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 MTCH1Q9NZJ7 389 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ZNF391Q9UJN7 358 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 MEX3AA1L020 520 aaKnown RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 PHF1O43189 567 aaPredicted RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 FBXO24O75426 580 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 NXPH3O95157 252 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 IL18BPO95998 194 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 BTN1A1Q13410 526 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 SNTB1Q13884 538 aaKnown RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 RBM39Q14498 530 aaKnown RBP9.41□□□□□ -0.9
DDX56-203ENST00000421223 FBXW9Q5XUX1 488 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 FAM122CQ6P4D5 195 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 LYZL2Q7Z4W2 148 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 POM121L2Q96KW2 1035 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ACACAQ13085 2346 aa9.41□□□□□ -0.9
DDX56-203ENST00000421223 ST8SIA5O15466 376 aa9.4□□□□□ -0.9
DDX56-203ENST00000421223 TNFSF12O43508 249 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms