RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 AWAT2Q6E213 333 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 GLIPR1L1Q6UWM5 242 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 C17orf107Q6ZR85 190 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 OR51T1Q8NGJ9 327 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 TBC1D15Q8TC07 691 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 FOXRED1Q96CU9 486 aaPredicted RBP17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 DMRTB1Q96MA1 342 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 NR1H4Q96RI1 486 aaPredicted RBP17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 PCDHB16Q9NRJ7 776 aa17.04■□□□□ 0.32
HMGXB4-203ENST00000420166 TRBV23-1A0A0A0MS06 115 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 TRIM64CA6NLI5 447 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 SIRPB1O00241 398 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 PSPNO60542 156 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 CSTBP04080 98 aaKnown RBP17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 FAM157CP0CG43 387 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 CD37P11049 281 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 SERPINA2P20848 420 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 GABRR1P24046 479 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 GPR176Q14439 515 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 IL13RA2Q14627 380 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 PIGYQ3MUY2 71 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 NHLRC3Q5JS37 347 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 C1orf100Q5SVJ3 147 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 Q6P435 159 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 OR8H2Q8N162 312 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 OSR2Q8N2R0 312 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 C1orf147Q96MC9 270 aaPredicted RBP17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 GFI1Q99684 422 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 STUB1Q9UNE7 303 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 MXRA5Q9NR99 2828 aa17.03■□□□□ 0.32
HMGXB4-203ENST00000420166 FSHBP01225 129 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 ZNF44P15621 663 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 LMO1P25800 156 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 RBM11P57052 281 aaKnown RBP17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 CHST4Q8NCG5 386 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 OR5D13Q8NGL4 314 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 NANPQ8TBE9 248 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 UPRTQ96BW1 309 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 CHST6Q9GZX3 395 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 C19orf12Q9NSK7 152 aa17.02■□□□□ 0.32
HMGXB4-203ENST00000420166 TRAV1-2A0A0B4J238 106 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 A0A1W2PP11 408 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 A0A1W2PQ09 198 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 DEGS1O15121 323 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 GTF2F2P13984 249 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 MMP9P14780 707 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 MYL9P24844 172 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 FGF9P31371 208 aaPredicted RBP17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 OR3A1P47881 315 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 RIPPLY3P57055 190 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 ARF6P62330 175 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 RPL31P62899 125 aaKnown RBP17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 SCN1BQ07699 218 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 PDCD1Q15116 288 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 GRK1Q15835 563 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 METTL11BQ5VVY1 283 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 C22orf42Q6IC83 251 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 GDPD3Q7L5L3 318 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 KIR3DL3Q8N743 410 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 OR4S1Q8NGB4 309 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 PPP1R35Q8TAP8 253 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 SIRPDQ9H106 197 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 ONECUT1Q9UBC0 465 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 GHRLQ9UBU3 117 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 ST3GAL6Q9Y274 331 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 AK6Q9Y3D8 172 aaKnown RBP17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 KPTNQ9Y664 436 aa17.01■□□□□ 0.31
HMGXB4-203ENST00000420166 A0A0G2JK05 382 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 SLC33A1O00400 549 aaPredicted RBP17■□□□□ 0.31
HMGXB4-203ENST00000420166 MGST3O14880 152 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 SLC22A1O15245 554 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 CD36P16671 472 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 JUNBP17275 347 aaPredicted RBP17■□□□□ 0.31
HMGXB4-203ENST00000420166 FAM185AQ8N0U4 392 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 OR4M1Q8NGD0 313 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 OR6M1Q8NGM8 313 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 WDFY2Q96P53 400 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 OR51E2Q9H255 320 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 TXNL4BQ9NX01 149 aaKnown RBP17■□□□□ 0.31
HMGXB4-203ENST00000420166 SSR3Q9UNL2 185 aa17■□□□□ 0.31
HMGXB4-203ENST00000420166 KIAA2026Q5HYC2 2103 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 SHISA3A0PJX4 238 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 SLC17A2O00624 439 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 TOX4O94842 621 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 UBBP0CG47 229 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 SMIM18P0DKX4 95 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 HTR2CP28335 458 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 EDDM3BP56851 147 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 EDDM3AQ14507 147 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 KLF17Q5JT82 389 aaPredicted RBP16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 LINC00596Q86U02 117 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 CMTM4Q8IZR5 234 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 TMEM104Q8NE00 496 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 MRPS24Q96EL2 167 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 TBX15Q96SF7 602 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 PCGF1Q9BSM1 259 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 PPA2Q9H2U2 334 aa16.99■□□□□ 0.31
HMGXB4-203ENST00000420166 PDCD5O14737 125 aa16.98■□□□□ 0.31
HMGXB4-203ENST00000420166 MGMTP16455 207 aa16.98■□□□□ 0.31
HMGXB4-203ENST00000420166 GADD45AP24522 165 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms