RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PRSS38A1L453 326 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ZFP92A6NM28 416 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 MSTNO14793 375 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 IL6RP08887 468 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM225BP0DP42 221 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 GNB2P62879 340 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 MPV17LQ2QL34 196 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 GAB4Q2WGN9 574 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 PHLDA2Q53GA4 152 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 C6orf201Q7Z4U5 140 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 OR5D18Q8NGL1 313 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 C11orf40Q8WZ69 217 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 HDHD3Q9BSH5 251 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 PRTFDC1Q9NRG1 225 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 MYO7BQ6PIF6 2116 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ARHGEF17Q96PE2 2063 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 LNP1A1A4G5 178 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 HCRTR1O43613 425 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 DYNLT3P51808 116 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TRA2AQ13595 282 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 KISS1Q15726 138 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 C16orf82Q7Z2V1 217 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 WDFY1Q8IWB7 410 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 OR8B12Q8NGG6 310 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NECAP2Q9NVZ3 263 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 B3GALT1Q9Y5Z6 326 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CHD3Q12873 2000 aaKnown RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TMED7-TICAM2A0A0A6YYA0 188 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 OTOL1A6NHN0 477 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 C17orf51A8MQB3 221 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NUDT14O95848 222 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ONECUT2O95948 504 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 GP1BBP13224 206 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TUBG1P23258 451 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CTHP32929 405 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NKX2-1P43699 371 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 MTCP1P56278 107 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TAS2R30P59541 319 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ERVS71-1P61550 626 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 PRDX4Q13162 271 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CST6Q15828 149 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CPEB2Q7Z5Q1 589 aaKnown RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 CENPVQ7Z7K6 275 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ODF3L1Q8IXM7 274 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 GPR119Q8TDV5 335 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 TMEM37Q8WXS4 190 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 FAM71F1Q96KD3 344 aaPredicted RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 MRGPRX4Q96LA9 322 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 GAL3ST4Q96RP7 486 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ADOQ96SZ5 270 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 C20orf144Q9BQM9 153 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NXF5Q9H1B4 397 aaKnown RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NKX2-4Q9H2Z4 354 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF665Q9H7R5 613 aa6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 NXT1Q9UKK6 140 aaKnown RBP6.98□□□□□ -1.29
HMGXB4-202ENST00000418170 PHF1O43189 567 aaPredicted RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 SELEP16581 610 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 CCL1P22362 96 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 BAXQ07812 192 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 HLA-CQ95604 372 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 SLC46A1Q96NT5 459 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 FUT9Q9Y231 359 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 A0A1W2PP55 124 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 NKX2-6A6NCS4 301 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 NPIPA5E9PKD4 350 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 SSSCA1O60232 199 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 CST7O76096 145 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 CTSBP07858 339 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 CD82P27701 267 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 GALR1P47211 349 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 RPS21P63220 83 aaKnown RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 RPP30P78346 268 aaKnown RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 DEFB103AP81534 67 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 EIF3IQ13347 325 aaKnown RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 GPM6BQ13491 265 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 KIAA2026Q5HYC2 2103 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF100Q8IYN0 542 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 PRSS58Q8IYP2 241 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 D2HGDHQ8N465 521 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 NECAP1Q8NC96 275 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 CCL4L1Q8NHW4 92 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF845Q96IR2 970 aaPredicted RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 MIEN1Q9BRT3 115 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 Q9N2K0 584 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 PLEKHJ1Q9NW61 149 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF319Q9P2F9 582 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 NAT8Q9UHE5 227 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 NPIPA1Q9UND3 350 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 ZNF850A8MQ14 1090 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 IFNL4K9M1U5 179 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 SIAH2O43255 324 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 LCATP04180 440 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 JMJD7P0C870 316 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 PGCP20142 388 aa6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 DAP3P51398 398 aaKnown RBP6.97□□□□□ -1.29
HMGXB4-202ENST00000418170 FXYD4P59646 89 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms