RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SLITRK2Q9H156 845 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 NOX4Q9NPH5 578 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 SF3B6Q9Y3B4 125 aaKnown RBP12.11□□□□□ -0.47
CHD1-202ENST00000414220 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
CHD1-202ENST00000414220 TRBV5-7A0A0A0MS05 114 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 IGKV1-12A0A0C4DH73 117 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 A0A1W2PPK0 400 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 ZNF737O75373 536 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 HTR3BO95264 441 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 IGKV1D-12P01611 117 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 MAS1P04201 325 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 CALCBP10092 127 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 IGFBP3P17936 291 aaPredicted RBP12.1□□□□□ -0.47
CHD1-202ENST00000414220 DUSP1P28562 367 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 RANBP1P43487 201 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 GABARAPL2P60520 117 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 SCN1BQ07699 218 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 ACSM3Q53FZ2 586 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 BRD3OSQ6XYD6 125 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 JAGN1Q8N5M9 183 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 FOXRED1Q96CU9 486 aaPredicted RBP12.1□□□□□ -0.47
CHD1-202ENST00000414220 DERL3Q96Q80 235 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 OR5M11Q96RB7 305 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 TMED9Q9BVK6 235 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 SIRT7Q9NRC8 400 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 C19orf12Q9NSK7 152 aa12.1□□□□□ -0.47
CHD1-202ENST00000414220 SIRPB1O00241 398 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 VENTXO95231 258 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 OR2H2O95918 312 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 LMO1P25800 156 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 ERP29P30040 261 aaKnown RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 MLLT11Q13015 90 aaPredicted RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 SPATA3Q8NHX4 192 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 NR1H4Q96RI1 486 aaPredicted RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 MDFIQ99750 246 aa12.09□□□□□ -0.47
CHD1-202ENST00000414220 UNKLQ9H9P5 680 aaKnown RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 LSM2Q9Y333 95 aaKnown RBP12.09□□□□□ -0.47
CHD1-202ENST00000414220 TMEM82A0PJX8 343 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 H3BUI4 141 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 ARL6IP5O75915 188 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 PAHP00439 452 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 GTF2F2P13984 249 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 OR3A4PP47883 348 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 UBE2E1P51965 193 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 TPBGQ13641 420 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 TBCEQ15813 527 aaPredicted RBP12.08□□□□□ -0.48
CHD1-202ENST00000414220 KRTAP24-1Q3LI83 254 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 HSD17B12Q53GQ0 312 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 LIPKQ5VXJ0 399 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 GLT8D1Q68CQ7 371 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 C17orf107Q6ZR85 190 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 ZNF367Q7RTV3 350 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 TRAPPC6BQ86SZ2 158 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 LINC00596Q86U02 117 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 OR51T1Q8NGJ9 327 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 ZNF714Q96N38 554 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 MGLLQ99685 303 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 BARHL1Q9BZE3 327 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 CHST6Q9GZX3 395 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 IL36GQ9NZH8 169 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
CHD1-202ENST00000414220 TRGV10A0A0A0MS01 117 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 A0A0G2JK05 382 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 CDRT1O95170 752 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 RBP4P02753 201 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 FBP1P09467 338 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 ZNF728P0DKX0 622 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 SERPINA2P20848 420 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 KCNJ3P48549 501 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 LGALS4P56470 323 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 ACTG1P63261 375 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 RUSC1-AS1Q66K80 236 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 AWAT2Q6E213 333 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 UNQ9370/PRO34162Q6UXP9 181 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 Q8N7P7 452 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 Q8NFD4 153 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 OR4S1Q8NGB4 309 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 SGCDQ92629 289 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 ORAI1Q96D31 301 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
CHD1-202ENST00000414220 UQCC2Q9BRT2 126 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms