RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 SCN1BQ07699 218 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 ZNF782Q6ZMW2 699 aaPredicted RBP12.09□□□□□ -0.47
LIMS4-201ENST00000413601 TPRX1Q8N7U7 411 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
LIMS4-201ENST00000413601 OR4S1Q8NGB4 309 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 ORAI1Q96D31 301 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 GPER1Q99527 375 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 NKX3-1Q99801 234 aaPredicted RBP12.09□□□□□ -0.47
LIMS4-201ENST00000413601 HEXA-AS1Q9H8Q6 139 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
LIMS4-201ENST00000413601 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 C17orf98A8MV24 154 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 GABRPO00591 440 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 MAGEB3O15480 346 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 OR2H2O95918 312 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 PAHP00439 452 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF728P0DKX0 622 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 COX7A1P24310 79 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 OR3A1P47881 315 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 MEF2CQ06413 473 aaPredicted RBP12.08□□□□□ -0.48
LIMS4-201ENST00000413601 ACSM1Q08AH1 577 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 DOC2BQ14184 412 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 C17orf50Q8WW18 174 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 DPAGT1Q9H3H5 408 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 RHOFQ9HBH0 211 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 EXOSC4Q9NPD3 245 aaKnown RBP12.08□□□□□ -0.48
LIMS4-201ENST00000413601 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
LIMS4-201ENST00000413601 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 H0YJX3 145 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 MGST3O14880 152 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 MYL12BO14950 172 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 CRYBA1P05813 215 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 BMXP51813 675 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 WNT4P56705 351 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 RPS11P62280 158 aaKnown RBP eCLIP12.07□□□□□ -0.48
LIMS4-201ENST00000413601 MIDNQ504T8 468 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 YIF1BQ5BJH7 314 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 C6orf141Q5SZD1 244 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 NANOGP1Q8N7R0 232 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 TNFAIP8L1Q8WVP5 186 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 CPNE2Q96FN4 548 aaPredicted RBP12.07□□□□□ -0.48
LIMS4-201ENST00000413601 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 PGLYRP3Q96LB9 341 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF714Q96N38 554 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 FAM192AQ9GZU8 254 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
LIMS4-201ENST00000413601 hADV38S2A0JD32 116 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PTGES3LE9PB15 166 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 GPR137BO60478 399 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 ALDOBP05062 364 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF44P15621 663 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 MDKP21741 143 aaPredicted RBP12.06□□□□□ -0.48
LIMS4-201ENST00000413601 LMO1P25800 156 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PAX6P26367 422 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 OR3A4PP47883 348 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 MTNR1BP49286 362 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 TAS2R43P59537 309 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PPP3R1P63098 170 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 RELBQ01201 579 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 TAF9Q16594 264 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 Q499Y3 187 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 DDI2Q5TDH0 399 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 ELP2Q6IA86 826 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 Q6P435 159 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PXT1Q8NFP0 134 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PPP1R35Q8TAP8 253 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 DYRK2Q92630 601 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 NR1H4Q96RI1 486 aaPredicted RBP12.06□□□□□ -0.48
LIMS4-201ENST00000413601 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 C1RLQ9NZP8 487 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 LINC00312Q9Y6C7 94 aa12.06□□□□□ -0.48
LIMS4-201ENST00000413601 A0A0G2JK05 382 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 SLC33A1O00400 549 aaPredicted RBP12.05□□□□□ -0.48
LIMS4-201ENST00000413601 DEGS1O15121 323 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 CDRT1O95170 752 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 RBP4P02753 201 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 CDK1P06493 297 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 IGHV1-8P0DP01 117 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 IGFBP3P17936 291 aaPredicted RBP12.05□□□□□ -0.48
LIMS4-201ENST00000413601 CELP19835 753 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 ERP29P30040 261 aaKnown RBP12.05□□□□□ -0.48
LIMS4-201ENST00000413601 BDKRB2P30411 391 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 PTGFRP43088 359 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 P2RX3P56373 397 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 AESQ08117 197 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 RSU1Q15404 277 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 TRAPPC6BQ86SZ2 158 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 SGCDQ92629 289 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 OR14A2Q96R54 314 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 ING3Q9NXR8 418 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
LIMS4-201ENST00000413601 TRAV8-7A0A075B6U6 113 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 MAGEA13PA6NCF6 341 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 BTBD17A6NE02 478 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 H0YHG0 523 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms