RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 CATSPERDQ86XM0 798 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 OR4K15Q8NH41 348 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM54Q969K7 222 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 SCMH1Q96GD3 660 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 DERL3Q96Q80 235 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 RIMS4Q9H426 269 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 PRSS50Q9UI38 385 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF835Q9Y2P0 537 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 FAM96BQ9Y3D0 163 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 CTDSPLO15194 276 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 GIPP09681 153 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 NPY1RP25929 384 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 NKX2-5P52952 324 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 PRDX4Q13162 271 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 HAGHQ16775 308 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 IQCJQ1A5X6 159 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 RPUSD3Q6P087 351 aaKnown RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 CXorf67Q86X51 503 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF610Q8N9Z0 462 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 OR2AE1Q8NHA4 323 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 ELOVL1Q9BW60 279 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 RAB1BQ9H0U4 201 aa7.46□□□□□ -1.22
SYNE1-211ENST00000413186 UBE2J1Q9Y385 318 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-211ENST00000413186 TOR1AO14656 332 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SPINT2O43291 252 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SNCAP37840 140 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 ESCO2Q56NI9 601 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 ABLIM2Q6H8Q1 611 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 CMTM4Q8IZR5 234 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OR2Z1Q8NG97 314 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 C22orf15Q8WYQ4 148 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 RTN4RQ9BZR6 473 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 MS4A5Q9H3V2 200 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 J3QW42 95 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 AKR7A2O43488 359 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 RPS27AP62979 156 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 UBA52P62987 128 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PSG4Q00888 419 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PRSS35Q8N3Z0 413 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM185AQ8NFB2 350 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OR10K1Q8NGX5 313 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 NMNAT2Q9BZQ4 307 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 LSM2Q9Y333 95 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SPTBN1Q01082 2364 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PPP5D1E7EU14 171 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SPRY3O43610 288 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SEMA7AO75326 666 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 EIF4EP06730 217 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PTGDSP41222 190 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 GAS1P54826 345 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SUMO1P63165 101 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 TNK1Q13470 666 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 IGFL3Q6UXB1 125 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OR2W3Q7Z3T1 314 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 LHFPL4Q7Z7J7 247 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 IL1F10Q8WWZ1 152 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OR1A1Q9P1Q5 309 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 GNG12Q9UBI6 72 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 A0A0U1RQV5 110 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 HLA-AP01891 365 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 GSK3AP49840 483 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 ASCL1P50553 236 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 RPP30P78346 268 aaKnown RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 BAK1Q16611 211 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OSR2Q8N2R0 312 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PRR18Q8N4B5 295 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 SUMF2Q8NBJ7 301 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OR52I2Q8NH67 350 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 TOMM40LQ969M1 308 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 CXXC4Q9H2H0 198 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 BANF2Q9H503 90 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 OCEL1Q9H607 264 aa7.45□□□□□ -1.22
SYNE1-211ENST00000413186 PLEKHB1Q9UF11 243 aaPredicted RBP7.45□□□□□ -1.22
SYNE1-211ENST00000413186 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 PINLYPA6NC86 204 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 DCTN6O00399 190 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 DFFBO76075 338 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 LYPD3O95274 346 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 IL5P05113 134 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 GLAP06280 429 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 CCL2P13500 99 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 CA6P23280 308 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 CCKARP32238 428 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 BMI1P35226 326 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 AMTP48728 403 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 EDDM3BP56851 147 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 KISS1Q15726 138 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 BEX5Q5H9J7 111 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 MRGPRGQ86SM5 289 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 DUSP18Q8NEJ0 188 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms