RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 H3BUX3 64 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 GABRPO00591 440 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 PAHP00439 452 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 OCM2P0CE71 109 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 OCMP0CE72 109 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-202ENST00000411423 IGHV1-8P0DP01 117 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 CCDC58Q4VC31 144 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 OLFML2AQ68BL7 652 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 SAXO1Q8IYX7 474 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 ZSCAN4Q8NAM6 433 aaPredicted RBP15.46■□□□□ 0.07
SF3A1-202ENST00000411423 SETD9Q8NE22 299 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 OR5D14Q8NGL3 314 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 OR4F5Q8NH21 305 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 TMEM80Q96HE8 168 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 SSX3Q99909 188 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 HEXA-AS1Q9H8Q6 139 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 NEK6Q9HC98 313 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 EXOSC4Q9NPD3 245 aaKnown RBP15.46■□□□□ 0.07
SF3A1-202ENST00000411423 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.07
SF3A1-202ENST00000411423 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.07
SF3A1-202ENST00000411423 A0A1W2PPH5 198 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 CLPSL1A2RUU4 121 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 FAM90A8PA6NJQ4 464 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 MGST3O14880 152 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 TMEM225BP0DP42 221 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 LMO1P25800 156 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 RPL15P61313 204 aaKnown RBP15.45■□□□□ 0.06
SF3A1-202ENST00000411423 RPS11P62280 158 aaKnown RBP eCLIP15.45■□□□□ 0.06
SF3A1-202ENST00000411423 MEF2CQ06413 473 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-202ENST00000411423 ST3GAL4Q11206 333 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 DMKNQ6E0U4 476 aaPredicted RBP15.45■□□□□ 0.06
SF3A1-202ENST00000411423 TMPRSS11AQ6ZMR5 421 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 SGMS2Q8NHU3 365 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 GPR148Q8TDV2 347 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 SMIM19Q96E16 107 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 ZNF714Q96N38 554 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 SLITRK2Q9H156 845 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 BEX1Q9HBH7 125 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 ZNF581Q9P0T4 197 aa15.45■□□□□ 0.06
SF3A1-202ENST00000411423 A0A0G2JK05 382 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 SLC33A1O00400 549 aaPredicted RBP15.44■□□□□ 0.06
SF3A1-202ENST00000411423 RPSAP08865 295 aaKnown RBP15.44■□□□□ 0.06
SF3A1-202ENST00000411423 JUNBP17275 347 aaPredicted RBP15.44■□□□□ 0.06
SF3A1-202ENST00000411423 GDNFP39905 211 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 GLIPR1P48060 266 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 P2RX3P56373 397 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 LY6EQ16553 131 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 GDPGP1Q6ZNW5 385 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 OR10K1Q8NGX5 313 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 OR52N1Q8NH53 320 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 PPP1R35Q8TAP8 253 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 HAVCR2Q8TDQ0 301 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 NRG4Q8WWG1 115 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 COQ2Q96H96 371 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 PGLYRP3Q96LB9 341 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 PPA2Q9H2U2 334 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 PSORS1C1Q9UIG5 152 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 LINC00312Q9Y6C7 94 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 HSPE1-MOB4S4R3N1 261 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 PKD1L1Q8TDX9 2849 aa15.44■□□□□ 0.06
SF3A1-202ENST00000411423 TRBV5-5A0A0J9YX44 114 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 hADV38S2A0JD32 116 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 IRGMA1A4Y4 181 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 MAGEA13PA6NCF6 341 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 SH2D1BO14796 132 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 RBP4P02753 201 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 MYL12AP19105 171 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 RAB3AP20336 220 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 ERP29P30040 261 aaKnown RBP15.43■□□□□ 0.06
SF3A1-202ENST00000411423 C21orf33P30042 268 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-202ENST00000411423 OR3A4PP47883 348 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 PROK1P58294 105 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 SCN1BQ07699 218 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 AESQ08117 197 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 PRR31Q5SQ13 230 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 UTF1Q5T230 341 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 ZNF626Q68DY1 528 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 SATL1Q86VE3 508 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 C8orf59Q8N0T1 100 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-202ENST00000411423 OR11H6Q8NGC7 330 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 TFAP2CQ92754 450 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 GHSRQ92847 366 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 TMEM106AQ96A25 262 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 ZNF281Q9Y2X9 895 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 RNF114Q9Y508 228 aa15.43■□□□□ 0.06
SF3A1-202ENST00000411423 A0A1B0GUS0 222 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 hCG_1809904A0A1W2PP81 198 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 A0A1W2PPE2 198 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 A0A1W2PR64 198 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 A0A1W2PRV1 198 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 ARG1P05089 322 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 ZNF44P15621 663 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 IGFBP3P17936 291 aaPredicted RBP15.42■□□□□ 0.06
SF3A1-202ENST00000411423 LRRC75BQ2VPJ9 315 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 PLA1AQ53H76 456 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 DHRS7BQ6IAN0 325 aaPredicted RBP15.42■□□□□ 0.06
SF3A1-202ENST00000411423 ASCL4Q6XD76 172 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 PXT1Q8NFP0 134 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 OR5R1Q8NH85 324 aa15.42■□□□□ 0.06
SF3A1-202ENST00000411423 TNFAIP8L1Q8WVP5 186 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms