RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZNF552Q9H707 407 aaPredicted RBP10□□□□□ -0.81
PRPF40A-202ENST00000410080 PLEKHA2Q9HB19 425 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 A0A0B4J293 547 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 C16orf82Q7Z2V1 217 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 WNK3Q9BYP7 1800 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 RREB1Q92766 1687 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 TRAV34A0A0B4J273 112 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 TGOLN2O43493 480 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 RAF1P04049 648 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 ADRA2AP08913 450 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 WNT5AP41221 380 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 REG1BP48304 166 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF273Q14593 569 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 TMEM196Q5HYL7 178 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 PABPC1L2AQ5JQF8 200 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 TMEM18Q96B42 140 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 GALNSP34059 522 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 LY6EQ16553 131 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 KLHDC1Q8N7A1 406 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 DERL3Q96Q80 235 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
PRPF40A-202ENST00000410080 NHSL1Q5SYE7 1610 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CD82P27701 267 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 SH2D2AQ9NP31 389 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 MED19A0JLT2 244 aaPredicted RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 RER1O15258 196 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 PATE4P0C8F1 98 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 DGCR2P98153 550 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CEBPEQ15744 281 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 C21orf62-AS1Q17RA5 79 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CARFQ8N187 725 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 SMIM19Q96E16 107 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 AKIRIN1Q9H9L7 192 aaPredicted RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 OR4E1P0C645 316 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF32P17041 273 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 MDH2P40926 338 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 PPOXP50336 477 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 SSX1Q16384 188 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 FAM219BQ5XKK7 198 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 NTN4Q9HB63 628 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 BET1LQ9NYM9 111 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 YBX2Q9Y2T7 364 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 TIAL1Q01085 375 aaKnown RBP eCLIP9.99□□□□□ -0.816e-7■■■■■ 32.3
PRPF40A-202ENST00000410080 NHLRC1Q6VVB1 395 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 PRNTQ86SH4 94 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 Q8WTZ3 238 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CHAC2Q8WUX2 184 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 FLVCR2Q9UPI3 526 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 PRSS8Q16651 343 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 LGALSLQ3ZCW2 172 aaPredicted RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 SPANXN1Q5VSR9 72 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 STAC2Q6ZMT1 411 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 MOGAT1Q96PD6 335 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 GPX7Q96SL4 187 aaPredicted RBP9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 DHHO43323 396 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 OR8A1Q8NGG7 326 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 PHYHIPQ92561 330 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF426Q9BUY5 554 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 CMC2Q9NRP2 79 aa9.99□□□□□ -0.81
PRPF40A-202ENST00000410080 TBX19O60806 448 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 NSUN5P2Q63ZY6 315 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 TRAT1Q6PIZ9 186 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 OR13F1Q8NGS4 319 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ORAI1Q96D31 301 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 RPP25Q9BUL9 199 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 PDFQ9HBH1 243 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ASB1Q9Y576 335 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 PAPPAQ13219 1627 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CD3DP04234 171 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 SNX22Q96L94 193 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF137PP52743 207 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 PWWP2BQ6NUJ5 590 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 NANOGP1Q8N7R0 232 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 OR4C12Q96R67 309 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 IL17BQ9UHF5 180 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ANXA10Q9UJ72 324 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ZMIZ1Q9ULJ6 1067 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 M0R2Z0 102 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CD1EP15812 388 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 RELAQ04206 551 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 FMODQ06828 376 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 KISS1Q15726 138 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 RNF212Q495C1 297 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 SCARB1Q8WTV0 552 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 FAM222BQ8WU58 562 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 LHX9Q9NQ69 397 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CYSLTR2Q9NS75 346 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 A0A1B0GVG6 124 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 UPK1AO00322 258 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 HLXQ14774 488 aaPredicted RBP9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 NUFIP2Q7Z417 695 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CENPVQ7Z7K6 275 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms