RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 LRRTM1Q86UE6 522 aa19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 FAM185AQ8N0U4 392 aa19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 NKAIN3Q8N8D7 197 aa19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 SNX22Q96L94 193 aa19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 TBX15Q96SF7 602 aa19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 MRPS28Q9Y2Q9 187 aaKnown RBP19.65■□□□□ 0.74
UBE2E3-202ENST00000410062 TRBV23-1A0A0A0MS06 115 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 TRAV40A0A0B4J280 105 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 IFNA2P01563 188 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 LYPD6Q86Y78 171 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 CDH26Q8IXH8 852 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 OR8H2Q8N162 312 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 OR4D6Q8NGJ1 314 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 C22orf15Q8WYQ4 148 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 PHYHIPQ92561 330 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 FCGR1BQ92637 280 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 NDUFB11Q9NX14 153 aa19.64■□□□□ 0.73
UBE2E3-202ENST00000410062 MEGF11A6BM72 1044 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 ZNF44P15621 663 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 SERPINA2P20848 420 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 BMXP51813 675 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 RPL31P62899 125 aaKnown RBP19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 PIGYQ3MUY2 71 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 Q6P435 159 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 Q8NFD4 153 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 OR4S1Q8NGB4 309 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 IL36GQ9NZH8 169 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 NUP50Q9UKX7 468 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 KPTNQ9Y664 436 aa19.63■□□□□ 0.73
UBE2E3-202ENST00000410062 A0A1W2PP11 408 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 CSTBP04080 98 aaKnown RBP19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 EDDM3BP56851 147 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 EDDM3AQ14507 147 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 GRK1Q15835 563 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 SLC22A6Q4U2R8 563 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 AWAT2Q6E213 333 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 GLIPR1L1Q6UWM5 242 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 GDPD3Q7L5L3 318 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 OR51T1Q8NGJ9 327 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 DMRTB1Q96MA1 342 aa19.62■□□□□ 0.73
UBE2E3-202ENST00000410062 CCRL2O00421 344 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 DEGS1O15121 323 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 OR3A1P47881 315 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 TMEM200BQ69YZ2 307 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 VMO1Q7Z5L0 202 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 CMTM4Q8IZR5 234 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 Q8N7P7 452 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 OR5D13Q8NGL4 314 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 SLITRK2Q9H156 845 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 OCEL1Q9H607 264 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 ZNF69Q9UC07 566 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 A0A0G2JK05 382 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 MEX3AA1L020 520 aaKnown RBP19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 ARL6IP5O75915 188 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 LMO1P25800 156 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 CALRP27797 417 aaKnown RBP19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 DLX1P56177 255 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 PRB3Q04118 309 aaPredicted RBP19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 NEDD8Q15843 81 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 OSR2Q8N2R0 312 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 KIR3DL3Q8N743 410 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 TPRX1Q8N7U7 411 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 UQCC2Q9BRT2 126 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 PPA2Q9H2U2 334 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 SIRT7Q9NRC8 400 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 ST3GAL6Q9Y274 331 aa19.61■□□□□ 0.73
UBE2E3-202ENST00000410062 SLC33A1O00400 549 aaPredicted RBP19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 ZNF780AO75290 641 aaPredicted RBP19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 TNFAIP8O95379 198 aa19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 SCGB2A2Q13296 93 aa19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 GLT8D1Q68CQ7 371 aa19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 BCL6BQ8N143 479 aaPredicted RBP19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 LHX4Q969G2 390 aa19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 ZNF581Q9P0T4 197 aa19.6■□□□□ 0.73
UBE2E3-202ENST00000410062 ZNF273Q14593 569 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 IL13RA2Q14627 380 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 GPR157Q5UAW9 335 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 CD200R1LQ6Q8B3 271 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 BRD3OSQ6XYD6 125 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 PDZD9Q8IXQ8 264 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 CHST4Q8NCG5 386 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 PPP1R35Q8TAP8 253 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 TBC1D15Q8TC07 691 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 C1orf147Q96MC9 270 aaPredicted RBP19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 SLC6A7Q99884 636 aa19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 SOX21Q9Y651 276 aaPredicted RBP19.59■□□□□ 0.73
UBE2E3-202ENST00000410062 CENPVL3A0A0U1RRI6 287 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 HSPB6O14558 160 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 MGST3O14880 152 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 CCL3L1P16619 93 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 RBM11P57052 281 aaKnown RBP19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 METAP1DQ6UB28 335 aaPredicted RBP19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 BPIFB2Q8N4F0 458 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 FOXRED1Q96CU9 486 aaPredicted RBP19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 GFI1Q99684 422 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 PCDHB16Q9NRJ7 776 aa19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 AK6Q9Y3D8 172 aaKnown RBP19.58■□□□□ 0.73
UBE2E3-202ENST00000410062 DSCAML1Q8TD84 2053 aa19.58■□□□□ 0.72
UBE2E3-202ENST00000410062 M0R1W7 72 aa19.57■□□□□ 0.72
UBE2E3-202ENST00000410062 GEMIN2O14893 280 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms