RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 Q96M66 194 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 WDFY2Q96P53 400 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 LPAR2Q9HBW0 351 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 GHRLQ9UBU3 117 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 NDUFS8O00217 210 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 DEGS1O15121 323 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 SOCS1O15524 211 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 PHF1O43189 567 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 PSPNO60542 156 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 HPGDSO60760 199 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 CAPZA1P52907 286 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 DSCR9P59020 149 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 RPS27AP62979 156 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 Q6P435 159 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 CCDC190Q86UF4 302 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 IZUMO1Q8IYV9 350 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM185AQ8NFB2 350 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 Q8NFD4 153 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 C6orf62Q9GZU0 229 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 ATG5Q9H1Y0 275 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 PALMDQ9NP74 551 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 ABCA2Q9BZC7 2435 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM82A0PJX8 343 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 CTDSP2O14595 271 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 SH2D1BO14796 132 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 EIF4EP06730 217 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF45Q02386 682 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 DCTN2Q13561 401 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF146Q15072 292 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 SHEQ5VZ18 495 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 DCDC5Q6ZRR9 648 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 MUC20Q8N307 709 aaPredicted RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 AP3S1Q92572 193 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 KCTD12Q96CX2 325 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 REG4Q9BYZ8 158 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 WDR12Q9GZL7 423 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF665Q9H7R5 613 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 ZMAT3Q9HA38 289 aaKnown RBP11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 RAB22AQ9UL26 194 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 SPATA2Q9UM82 520 aa11.74□□□□□ -0.53
CHRNA1-204ENST00000409323 A0A096LNT2 108 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 TRAV24A0A0B4J272 114 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 SLC33A1O00400 549 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 DVL1O14640 695 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 RGS5O15539 181 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 IGHV2-5P01817 119 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 USF1P22415 310 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 CD40LGP29965 261 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 BLVRBP30043 206 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 SPIN3Q5JUX0 258 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 PRSS57Q6UWY2 283 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 C6orf201Q7Z4U5 140 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 CMTM4Q8IZR5 234 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 OR4S1Q8NGB4 309 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 OR4M1Q8NGD0 313 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 ST8SIA4Q92187 359 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 PATZ1Q9HBE1 687 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 PCDHB16Q9NRJ7 776 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 ABRACLQ9P1F3 81 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 YLPM1P49750 1951 aaKnown RBP11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 MALRD1Q5VYJ5 2156 aa11.73□□□□□ -0.53
CHRNA1-204ENST00000409323 UBE2QL1A1L167 161 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 FAM157AC9JC47 383 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 H7C1Q1 480 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 SIGLEC5O15389 551 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 WNT2P09544 360 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 SLC25A16P16260 332 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 NDUFB7P17568 137 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 PITPNBP48739 271 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 LMO4P61968 165 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 IL13RA1P78552 427 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 IL13RA2Q14627 380 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 KCNJ8Q15842 424 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 PAN3Q58A45 887 aaKnown RBP11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 OLFML2AQ68BL7 652 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 LAX1Q8IWV1 398 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 SUMF2Q8NBJ7 301 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 CHST4Q8NCG5 386 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 OR8B3Q8NGG8 313 aa11.72□□□□□ -0.53
CHRNA1-204ENST00000409323 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms