RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TSPAN15O95858 294 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 OR2H2O95918 312 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 JUNBP17275 347 aaPredicted RBP15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 KIR2DS4P43632 304 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 EFNB2P52799 333 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 FAM189A2Q15884 450 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 CCBE1Q6UXH8 406 aaPredicted RBP15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 OR4C13Q8NGP0 309 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 MMP27Q9H306 513 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 NEK6Q9HC98 313 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 INPP5EQ9NRR6 644 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 MRPS18AQ9NVS2 196 aaKnown RBP15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 GLS2Q9UI32 602 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 RPL36Q9Y3U8 105 aaKnown RBP15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 PRKDCP78527 4128 aaKnown RBP15.58■□□□□ 0.08
SMARCB1-204ENST00000407422 SH2D1BO14796 132 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 WBP4O75554 376 aaKnown RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 GTF2A1P52655 376 aaPredicted RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 P2RX3P56373 397 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 OR5AK2Q8NH90 309 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 MALSU1Q96EH3 234 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 MYCBPQ99417 103 aaPredicted RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 RAB18Q9NP72 206 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 EXOSC4Q9NPD3 245 aaKnown RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 FOXJ3Q9UPW0 622 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 IGHV2-26A0A0B4J1V2 119 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 TMEM212A6NML5 194 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 HCKP08631 526 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 LIMS3P0CW19 117 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 LIMS4P0CW20 117 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 ERP29P30040 261 aaKnown RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 ZP1P60852 638 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 SCN1BQ07699 218 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 BAIAP2L2Q6UXY1 529 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 TRAPPC6BQ86SZ2 158 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 SERPINA12Q8IW75 414 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 PARP16Q8N5Y8 322 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 OR5D14Q8NGL3 314 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 FOXRED1Q96CU9 486 aaPredicted RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 NKX3-1Q99801 234 aaPredicted RBP15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 COMMD4Q9H0A8 199 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 SESN1Q9Y6P5 492 aa15.57■□□□□ 0.08
SMARCB1-204ENST00000407422 SULT1B1O43704 296 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 GBX2P52951 348 aaPredicted RBP15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 AESQ08117 197 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 IL18R1Q13478 541 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 KISS1Q15726 138 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 KLHL22Q53GT1 634 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 LIAT1Q6ZQX7 453 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 TMEM219Q86XT9 240 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 SAXO1Q8IYX7 474 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 NPFFR1Q9GZQ6 430 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 TMEM133Q9H2Q1 129 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 RANBP3Q9H6Z4 567 aaPredicted RBP15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 SMPD3Q9NY59 655 aaPredicted RBP15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 DHDHQ9UQ10 334 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 TCF19Q9Y242 345 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 HILPDAQ9Y5L2 63 aa15.56■□□□□ 0.08
SMARCB1-204ENST00000407422 A0A0G2JK05 382 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 CLIC3O95833 236 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 CCDC159P0C7I6 412 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 TMEM225BP0DP42 221 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 ZNF44P15621 663 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 LMO1P25800 156 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 GLIPR1P48060 266 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 MRPL28Q13084 256 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 LPCAT4Q643R3 524 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 XAF1Q6GPH4 301 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 Q6P435 159 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 C11orf44Q8N8P7 122 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 OR2T6Q8NHC8 308 aa15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 TSEN15Q8WW01 171 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 RGP1Q92546 391 aaPredicted RBP15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 UBE2J1Q9Y385 318 aaPredicted RBP15.55■□□□□ 0.08
SMARCB1-204ENST00000407422 A6NDX4 124 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ALX3O95076 343 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ETV1P50549 477 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 HABP2Q14520 560 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 CDK5R1Q15078 307 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 PRAMEF5Q5TYX0 476 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 KLHDC1Q8N7A1 406 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ZNF555Q8NEP9 628 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 OR51A2Q8NGJ7 313 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 FAM110DQ8TAY7 271 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 RPS4Y2Q8TD47 263 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 CLEC7AQ9BXN2 247 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ZNF702PQ9H963 129 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 FGF20Q9NP95 211 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ABCB10Q9NRK6 738 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ING3Q9NXR8 418 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 SLC33A1O00400 549 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 SOX2P48431 317 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 HERPUD1Q15011 391 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 LRRC36Q1X8D7 754 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 ZNF691Q5VV52 312 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 CNIH3Q8TBE1 160 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 COQ2Q96H96 371 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 JAM3Q9BX67 310 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 RHOFQ9HBH0 211 aa15.54■□□□□ 0.08
SMARCB1-204ENST00000407422 PCDHGB5Q9Y5G0 923 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms