RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.78■□□□□ 0.44
TPM1-208ENST00000404484 FUOMA2VDF0 154 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 NXPH2O95156 264 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 TCRBP04435 133 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 GLAP06280 429 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 OR4A8P0C604 315 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 ZNF81P51508 661 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 IKZF1Q13422 519 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 ADIPOQQ15848 244 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 RNASE10Q5GAN6 216 aaKnown RBP17.78■□□□□ 0.44
TPM1-208ENST00000404484 ATAD3CQ5T2N8 411 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 ZNF782Q6ZMW2 699 aaPredicted RBP17.78■□□□□ 0.44
TPM1-208ENST00000404484 RTN4RL2Q86UN3 420 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 BATF2Q8N1L9 274 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 ZNF488Q96MN9 340 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 CMSS1Q9BQ75 279 aaKnown RBP17.78■□□□□ 0.44
TPM1-208ENST00000404484 IFT22Q9H7X7 185 aa17.78■□□□□ 0.44
TPM1-208ENST00000404484 RCC2Q9P258 522 aaKnown RBP17.78■□□□□ 0.44
TPM1-208ENST00000404484 PFDN1O60925 122 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 DTYMKP23919 212 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 KRTAP10-9P60411 292 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 BTG1P62324 171 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 SPIN3Q5JUX0 258 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 BTN2A1Q7KYR7 527 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 UPRTQ96BW1 309 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 FAAP24Q9BTP7 215 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 EDARQ9UNE0 448 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 RNF115Q9Y4L5 304 aa17.77■□□□□ 0.44
TPM1-208ENST00000404484 SHISA9B4DS77 424 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 DISC1C4P0D8 188 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 INMT-MINDY4F8WBC2 141 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 HLA-DMAP28067 261 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 CCR6P51684 374 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 SNU13P55769 128 aaKnown RBP17.76■□□□□ 0.43
TPM1-208ENST00000404484 RAG2P55895 527 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 ZMYND11Q15326 602 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 PRAMEF6Q5VXH4 476 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 SFRP4Q6FHJ7 346 aaPredicted RBP17.76■□□□□ 0.43
TPM1-208ENST00000404484 HOGA1Q86XE5 327 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 GVQW1Q8N7I0 195 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 OR10Z1Q8NGY1 313 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 FAM222BQ8WU58 562 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 FBXW5Q969U6 566 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 MEGF10Q96KG7 1140 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 SULT4A1Q9BR01 284 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 FN3KRPQ9HA64 309 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 GLS2Q9UI32 602 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 AK3Q9UIJ7 227 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 PLCE1Q9P212 2302 aa17.76■□□□□ 0.43
TPM1-208ENST00000404484 SPRY3O43610 288 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 DHFRP00374 187 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 FCER2P06734 321 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 AMY2BP19961 511 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 TAS2R46P59540 309 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 RBMS2Q15434 407 aaKnown RBP17.75■□□□□ 0.43
TPM1-208ENST00000404484 WDR82Q6UXN9 313 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 GLCCI1Q86VQ1 547 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 C11orf53Q8IXP5 236 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 OR56B4Q8NH76 319 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 OR2V2Q96R30 315 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 HES4Q9HCC6 221 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 NUDT15Q9NV35 164 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 IL19Q9UHD0 177 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 SCP2D1Q9UJQ7 156 aa17.75■□□□□ 0.43
TPM1-208ENST00000404484 hCG_1807616A0A1W2PRN6 198 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 MCRIP1C9JLW8 97 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 SERPINF1P36955 418 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 CFHR2P36980 270 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 GATA4P43694 442 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 RBM39Q14498 530 aaKnown RBP17.74■□□□□ 0.43
TPM1-208ENST00000404484 DAZAP2Q15038 168 aaPredicted RBP17.74■□□□□ 0.43
TPM1-208ENST00000404484 ZNF146Q15072 292 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 FAAP20Q6NZ36 180 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 OR4S1Q8NGB4 309 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 OR4K15Q8NH41 348 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 GTF3AQ92664 365 aaKnown RBP17.74■□□□□ 0.43
TPM1-208ENST00000404484 ERGIC1Q969X5 290 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 HS3ST6Q96QI5 342 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 C12orf4Q9NQ89 552 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 ZNF701Q9NV72 531 aaPredicted RBP17.74■□□□□ 0.43
TPM1-208ENST00000404484 C1orf123Q9NWV4 160 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 RASL12Q9NYN1 266 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 NDUFB6O95139 128 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 AMY2AP04746 511 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 ADH4P08319 380 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 H2AFB2P0C5Z0 115 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 MPPED2Q15777 294 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 SMIM21Q3B7S5 101 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 BEST4Q8NFU0 473 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 SNAPC3Q92966 411 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 PRRT1Q99946 306 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 ST6GALNAC5Q9BVH7 336 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 C20orf85Q9H1P6 137 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 UFSP2Q9NUQ7 469 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 ZNF581Q9P0T4 197 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 IL36RNQ9UBH0 155 aa17.74■□□□□ 0.43
TPM1-208ENST00000404484 IGHV3-64DA0A0J9YX35 117 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 M0QYG6 137 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 M0R233 179 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 SH2D1BO14796 132 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms