RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TRAPPC6BQ86SZ2 158 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 SAXO1Q8IYX7 474 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 PARP16Q8N5Y8 322 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 HAVCR2Q8TDQ0 301 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 EXOSC4Q9NPD3 245 aaKnown RBP10.8□□□□□ -0.68
SDF4-203ENST00000403997 LINC00312Q9Y6C7 94 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 TRRAPQ9Y4A5 3859 aa10.8□□□□□ -0.68
SDF4-203ENST00000403997 IRGMA1A4Y4 181 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 FAM90A8PA6NJQ4 464 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 TIMM23O14925 209 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 MAGEB3O15480 346 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 SULT1B1O43704 296 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 OR2H2O95918 312 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 DCKP27707 260 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 OR3A1P47881 315 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 SOX2P48431 317 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 ETV1P50549 477 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 OR2G6Q5TZ20 316 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 ZNF691Q5VV52 312 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SDF4-203ENST00000403997 SATL1Q86VE3 508 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 DHRSXQ8N5I4 330 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 MALSU1Q96EH3 234 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 JAM3Q9BX67 310 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 RHOFQ9HBH0 211 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 TCF7L1Q9HCS4 588 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 RAB18Q9NP72 206 aa10.79□□□□□ -0.68
SDF4-203ENST00000403997 TBL2Q9Y4P3 447 aaKnown RBP10.79□□□□□ -0.68
SDF4-203ENST00000403997 FUOMA2VDF0 154 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 DEGS1O15121 323 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 ZNF44P15621 663 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 RAB3AP20336 220 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 ERP29P30040 261 aaKnown RBP10.78□□□□□ -0.68
SDF4-203ENST00000403997 GABRA5P31644 462 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 RAB13P51153 203 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 P2RX3P56373 397 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 IL18R1Q13478 541 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 RCN1Q15293 331 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 SSX2Q16385 188 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 ZNF626Q68DY1 528 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 DYNAPQ8N1N2 210 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 PIFOQ8TCI5 191 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 GPR148Q8TDV2 347 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 FOXRED1Q96CU9 486 aaPredicted RBP10.78□□□□□ -0.68
SDF4-203ENST00000403997 NR1H4Q96RI1 486 aaPredicted RBP10.78□□□□□ -0.68
SDF4-203ENST00000403997 C8orf4Q9NR00 106 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 ABCB10Q9NRK6 738 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
SDF4-203ENST00000403997 UBE2J1Q9Y385 318 aaPredicted RBP10.78□□□□□ -0.68
SDF4-203ENST00000403997 SESN1Q9Y6P5 492 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 KIAA2026Q5HYC2 2103 aa10.78□□□□□ -0.68
SDF4-203ENST00000403997 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 TRGV10A0A0A0MS01 117 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 A0A0G2JK05 382 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 ODF3BA8MYP8 253 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 M0QZ24 198 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 CD2P06729 351 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 MYL12AP19105 171 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 LMO1P25800 156 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 GLIPR1P48060 266 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 ZP1P60852 638 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 AESQ08117 197 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 MED21Q13503 144 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 CDK5R1Q15078 307 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 XAF1Q6GPH4 301 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 Q6P435 159 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 PACRGLQ8N7B6 248 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 CHST4Q8NCG5 386 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 OR4C13Q8NGP0 309 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 GPER1Q99527 375 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 TMEM133Q9H2Q1 129 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 CHCHD3Q9NX63 227 aaKnown RBP10.77□□□□□ -0.69
SDF4-203ENST00000403997 BABAM2Q9NXR7 383 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 ING3Q9NXR8 418 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 TAS2R4Q9NYW5 299 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 FBLN5Q9UBX5 448 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 SIGLEC9Q9Y336 463 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 EXOSC1Q9Y3B2 195 aaKnown RBP10.77□□□□□ -0.69
SDF4-203ENST00000403997 HILPDAQ9Y5L2 63 aa10.77□□□□□ -0.69
SDF4-203ENST00000403997 WNK1Q9H4A3 2382 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 IGHV2-26A0A0B4J1V2 119 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 VGLL3A8MV65 326 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 MMP23AO75900 390 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 KIR2DS4P43632 304 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 MTNR1BP49286 362 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 KRBOX4Q5JUW0 171 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 LDLRAD2Q5SZI1 272 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 MINOS1Q5TGZ0 78 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 ASPHD2Q6ICH7 369 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 LIAT1Q6ZQX7 453 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms