RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KIAA2026Q5HYC2 2103 aa12.41□□□□□ -0.42
TPM1-207ENST00000403994 TMEM212A6NML5 194 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 MPZL2O60487 215 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 ZFPL1O95159 310 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 FADS2O95864 444 aaKnown RBP12.4□□□□□ -0.42
TPM1-207ENST00000403994 RAB40BQ12829 278 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 DYNC1I2Q13409 638 aaKnown RBP12.4□□□□□ -0.42
TPM1-207ENST00000403994 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 SSX2Q16385 188 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 TMEM219Q86XT9 240 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 PQLC1Q8N2U9 271 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 RPS4Y2Q8TD47 263 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 APH1BQ8WW43 257 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 MALSU1Q96EH3 234 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
TPM1-207ENST00000403994 NKX3-1Q99801 234 aaPredicted RBP12.4□□□□□ -0.42
TPM1-207ENST00000403994 PDCD1LG2Q9BQ51 273 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 ZCCHC4Q9H5U6 513 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 ZNF702PQ9H963 129 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 NEK6Q9HC98 313 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 ABCB10Q9NRK6 738 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 GLS2Q9UI32 602 aa12.4□□□□□ -0.42
TPM1-207ENST00000403994 A6NDX4 124 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 E9PI62 339 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 SULT1B1O43704 296 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 MMP23AO75900 390 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 JUNBP17275 347 aaPredicted RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 ERP29P30040 261 aaKnown RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 RAB13P51153 203 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 ZP1P60852 638 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 MINOS1Q5TGZ0 78 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 CCBE1Q6UXH8 406 aaPredicted RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 ZBTB49Q6ZSB9 765 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 Q6ZTK2 550 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 SAXO1Q8IYX7 474 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 FAM110DQ8TAY7 271 aaPredicted RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 CFHR4Q92496 578 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 Q96MT0 163 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 CDCA4Q9BXL8 241 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 CLEC7AQ9BXN2 247 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 UBE2J1Q9Y385 318 aaPredicted RBP12.39□□□□□ -0.43
TPM1-207ENST00000403994 MINOS1-NBL1R4GNA1 71 aa12.39□□□□□ -0.43
TPM1-207ENST00000403994 LOC100130705A0A1B0GUX0 176 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 F2RL2O00254 374 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 SH2D1BO14796 132 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 HCKP08631 526 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 CSF1P09603 554 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 DYNLT3P51808 116 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 MRPL28Q13084 256 aaKnown RBP12.38□□□□□ -0.43
TPM1-207ENST00000403994 IL18R1Q13478 541 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 HABP2Q14520 560 aaPredicted RBP12.38□□□□□ -0.43
TPM1-207ENST00000403994 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 Q8N2B8 174 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 PARP16Q8N5Y8 322 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 C11orf44Q8N8P7 122 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 OR4P4Q8NGL7 312 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 OR5AK2Q8NH90 309 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 RGP1Q92546 391 aaPredicted RBP12.38□□□□□ -0.43
TPM1-207ENST00000403994 GAL3ST2Q9H3Q3 398 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 RHOFQ9HBH0 211 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 FAM118AQ9NWS6 357 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 PITPNC1Q9UKF7 332 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 DHDHQ9UQ10 334 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 PCDHGB5Q9Y5G0 923 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 DNAH3Q8TD57 4116 aa12.38□□□□□ -0.43
TPM1-207ENST00000403994 TRGV10A0A0A0MS01 117 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 WBP4O75554 376 aaKnown RBP12.37□□□□□ -0.43
TPM1-207ENST00000403994 ALX3O95076 343 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 CSN2P05814 226 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 LIMS3P0CW19 117 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 LIMS4P0CW20 117 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 VSIG10L2P0DP72 767 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 ZNF44P15621 663 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 GLIPR1P48060 266 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
TPM1-207ENST00000403994 KISS1Q15726 138 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
TPM1-207ENST00000403994 Q6P435 159 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 BAIAP2L2Q6UXY1 529 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 OR5D14Q8NGL3 314 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 COQ2Q96H96 371 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 JAM3Q9BX67 310 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 SERTAD4Q9NUC0 356 aa12.37□□□□□ -0.43
TPM1-207ENST00000403994 MRPS18AQ9NVS2 196 aaKnown RBP12.37□□□□□ -0.43
TPM1-207ENST00000403994 RPL36Q9Y3U8 105 aaKnown RBP12.37□□□□□ -0.43
TPM1-207ENST00000403994 ODAMA1E959 279 aa12.36□□□□□ -0.43
TPM1-207ENST00000403994 FAM172BPA6NC97 362 aa12.36□□□□□ -0.43
TPM1-207ENST00000403994 SLC33A1O00400 549 aaPredicted RBP12.36□□□□□ -0.43
TPM1-207ENST00000403994 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms