RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FNDC9Q8TBE3 224 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CPNE4Q96A23 557 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 REEP6Q96HR9 211 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SRXN1Q9BYN0 137 aa13.75□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IGKV1D-8A0A087WSZ0 117 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SYNGR3O43761 229 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CXCL13O43927 109 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SCRN3Q0VDG4 424 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PJVKQ0ZLH3 352 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IAH1Q2TAA2 248 aaPredicted RBP13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR1F12Q8NHA8 337 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF391Q9UJN7 358 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 AHRRA9YTQ3 701 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNHIT1O43257 154 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IFNA21P01568 189 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ADCYAP1P18509 176 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ACKR3P25106 362 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 C3AR1Q16581 482 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ASCL4Q6XD76 172 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 LHFPL2Q6ZUX7 228 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 PUSL1Q8N0Z8 303 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SMIM8Q96KF7 97 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 MICU1Q9BPX6 476 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TMEM38BQ9NVV0 291 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 NECAP2Q9NVZ3 263 aa13.74□□□□□ -0.21
CHRFAM7A-203ENST00000401522 KMT2BQ9UMN6 2715 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 F8W036 122 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GPR31O00270 319 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR5H8P0DN80 308 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 HKR1P10072 659 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 BLOC1S1P78537 153 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FLI1Q01543 452 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GFRALQ6UXV0 394 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR4A4PQ8NGN8 299 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAM57AQ8TBR7 257 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR2S2Q9NQN1 319 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 NDRG3Q9UGV2 375 aa13.73□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR6C6A6NF89 314 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CST4P01036 141 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GAPDHP04406 335 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 H2AFB1P0C5Y9 115 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IL32P24001 234 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 AKR1C2P52895 323 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SPAG16Q8N0X2 631 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 BBC3Q96PG8 261 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RGCCQ9H4X1 137 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TAF9BQ9HBM6 251 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TREM1Q9NP99 234 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 AK3Q9UIJ7 227 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF835Q9Y2P0 537 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAM230AA0A1W2PPH8 454 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 K7EPK0 472 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 DEDDO75618 318 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 LCATP04180 440 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RBP2P50120 134 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TMEM42Q69YG0 159 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RPL7L1Q6DKI1 246 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF774Q6NX45 483 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 DHRS11Q6UWP2 260 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TMEM200AQ86VY9 491 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF100Q8IYN0 542 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ST6GALNAC3Q8NDV1 305 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 OR2AE1Q8NHA4 323 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 FAAP24Q9BTP7 215 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SEC11CQ9BY50 192 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
CHRFAM7A-203ENST00000401522 KALRNO60229 2985 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SVILO95425 2214 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 NCOA6Q14686 2063 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 MSTNO14793 375 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SNAPINO95295 136 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 SYNGR4O95473 234 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CHATP28329 748 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 RPL12P30050 165 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 CAV2P51636 162 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 TAF9Q16594 264 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GGNBP1Q5YKI7 109 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 HAGHLQ6PII5 290 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 LDLRAD3Q86YD5 345 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 BORCS8Q96FH0 119 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 UQCC1Q9NVA1 299 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 IL36GQ9NZH8 169 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 ZNF175Q9Y473 711 aa13.71□□□□□ -0.21
CHRFAM7A-203ENST00000401522 GTF3C1Q12789 2109 aa13.71□□□□□ -0.22
CHRFAM7A-203ENST00000401522 IGKV1-27A0A075B6S5 117 aa13.7□□□□□ -0.22
CHRFAM7A-203ENST00000401522 ZNF716A6NP11 495 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms