RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 J3QT63 122 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 GPR31O00270 319 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 ADAM10O14672 748 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 CLDN1O95832 211 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 H3F3AP84243 136 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 UNC119Q13432 240 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 HOGA1Q86XE5 327 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM45BQ96B21 275 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 GALMQ96C23 342 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 CA10Q9NS85 328 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF629Q9UEG4 869 aaPredicted RBP12.16□□□□□ -0.46
SCAF4-202ENST00000399804 OPN4Q9UHM6 478 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 SYNGR3O43761 229 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 ACKR3P25106 362 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 EIF2S3LQ2VIR3 472 aaKnown RBP12.16□□□□□ -0.46
SCAF4-202ENST00000399804 GPR157Q5UAW9 335 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 CLEC18BQ6UXF7 455 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 LRRC29Q8WV35 223 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 WNT2BQ93097 391 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 LINC00470Q9BZP3 86 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 TAAR3PQ9P1P4 343 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 KLF3P57682 345 aaPredicted RBP12.16□□□□□ -0.46
SCAF4-202ENST00000399804 CEACAM21Q3KPI0 293 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM108Q6UXF1 575 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 GGNQ86UU5 652 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 AQP3Q92482 292 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 SUCNR1Q9BXA5 334 aa12.16□□□□□ -0.46
SCAF4-202ENST00000399804 ABCA4P78363 2273 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PTGER4P35408 488 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 AKR1D1P51857 326 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 MPPED2Q15777 294 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 LAMTOR1Q6IAA8 161 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 RNF141Q8WVD5 230 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PARP12Q9H0J9 701 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PRELID3BQ9Y3B1 194 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 NKX6-3A6NJ46 265 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PTAFRP25105 342 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 UCP2P55851 309 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 ASB13Q8WXK3 278 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 CNTNAP3BQ96NU0 1288 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 DHRS7CA6NNS2 312 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 SNTB1Q13884 538 aaKnown RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 C9orf62Q8N4C0 152 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
SCAF4-202ENST00000399804 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
SCAF4-202ENST00000399804 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
SCAF4-202ENST00000399804 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 PBDC1Q9BVG4 233 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 CXXC4Q9H2H0 198 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 RAB18Q9NP72 206 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 KIF25Q9UIL4 384 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 LRP5LA4QPB2 252 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 MPC2O95563 127 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 P2RY6Q15077 328 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 PIK3IP1Q96FE7 263 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
SCAF4-202ENST00000399804 AMDHD2Q9Y303 409 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 GFRA3O60609 400 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 DTYMKP23919 212 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 RAB32Q13637 225 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 MPV17LQ2QL34 196 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 FAM185AQ8N0U4 392 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 TAF9BQ9HBM6 251 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
SCAF4-202ENST00000399804 H7C2Y5 167 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 S100A6P06703 90 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 AADACP22760 399 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 CEACAM6P40199 344 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
SCAF4-202ENST00000399804 PLA2G2CQ5R387 149 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 ST8SIA2Q92186 375 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 SYNGR1O43759 233 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 TMEM211Q6ICI0 200 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 BAP18Q8IXM2 172 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 OR11H4Q8NGC9 324 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 AIFM2Q9BRQ8 373 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 NAA60Q9H7X0 242 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 FN3KRPQ9HA64 309 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
SCAF4-202ENST00000399804 AKAP6Q13023 2319 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms