RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CBX5P45973 191 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 SMIM21Q3B7S5 101 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 NKAPLQ5M9Q1 402 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 MEX3BQ6ZN04 569 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 TRAPPC6BQ86SZ2 158 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 CENPSQ8N2Z9 138 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 COX4I2Q96KJ9 171 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 SPOCK3Q9BQ16 436 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 FAAP24Q9BTP7 215 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 OCEL1Q9H607 264 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 FBXO9Q9UK97 447 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 CACNG2Q9Y698 323 aa16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 USP9YO00507 2555 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-205ENST00000397761 LINC00854A0A1B0GVQ3 168 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 hCG_1807616A0A1W2PRN6 198 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 FAM221AA4D161 298 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 WNT9BO14905 357 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 GLRA1P23415 457 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 DUSP1P28562 367 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 RCVRNP35243 200 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 PPOXP50336 477 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 SNRPD2P62316 118 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 CCL8P80075 99 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 IKZF1Q13422 519 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 ARFRP1Q13795 201 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 FIP1L1Q6UN15 594 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 Q6ZNX1 250 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 EGLN1Q9GZT9 426 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 DYNLRB1Q9NP97 96 aa16.4■□□□□ 0.22
PDLIM2-205ENST00000397761 DSCAML1Q8TD84 2053 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 DCHS2Q6V1P9 2916 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 COL12A1Q99715 3063 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 TRAV24A0A0B4J272 114 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 MEIS3P1A6NDR6 274 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 KNG1P01042 644 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 DANCRP0C864 163 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 EGR1P18146 543 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 LMO1P25800 156 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 BTCP35070 178 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 SNU13P55769 128 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 PDCD1Q15116 288 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 TRIM16LQ309B1 348 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 C11orf71Q6IPW1 123 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 MZT2BQ6NZ67 158 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 NRARPQ7Z6K4 114 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 DTX2Q86UW9 622 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 ZCCHC24Q8N2G6 241 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 TMEM229BQ8NBD8 167 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 FAIMQ9NVQ4 179 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 RNF7Q9UBF6 113 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 AK3Q9UIJ7 227 aa16.39■□□□□ 0.21
PDLIM2-205ENST00000397761 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 NAP1L6A6NFF2 107 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 SSX4O60224 188 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 CD8AP01732 235 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 CD74P04233 296 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 SLC6A1P30531 599 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 TAS2R19P59542 299 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 ATAD3CQ5T2N8 411 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 SHEQ5VZ18 495 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 HRASLSQ9HDD0 168 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 CBLN4Q9NTU7 201 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 PPP1R3CQ9UQK1 317 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
PDLIM2-205ENST00000397761 CENPXA8MT69 81 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 IFNL4K9M1U5 179 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 SH2D1BO14796 132 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 DEGS1O15121 323 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 OR2H2O95918 312 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 DTYMKP23919 212 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 HOGA1Q86XE5 327 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 GVQW1Q8N7I0 195 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 SUMF2Q8NBJ7 301 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 DUSP18Q8NEJ0 188 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 OR11L1Q8NGX0 322 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 HPS1Q92902 700 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 CHST6Q9GZX3 395 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 SAP30LQ9HAJ7 183 aa16.37■□□□□ 0.21
PDLIM2-205ENST00000397761 SLC33A1O00400 549 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 HAND1O96004 215 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 NAPSAO96009 420 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 SPNP16150 400 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 TBPP20226 339 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 HOXA4Q00056 320 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 AGAP6Q5VW22 663 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 BRICD5Q6PL45 260 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 SNAPC3Q92966 411 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 DPCDQ9BVM2 203 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 IFT46Q9NQC8 304 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 DECR2Q9NUI1 292 aa16.36■□□□□ 0.21
PDLIM2-205ENST00000397761 UBE2QL1A1L167 161 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 MCRIP1C9JLW8 97 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 AKAIN1P0CW23 69 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 GMFBP60983 142 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 RBM39Q14498 530 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 PLA1AQ53H76 456 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 CCBE1Q6UXH8 406 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 OR4C16Q8NGL9 310 aa16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 CMSS1Q9BQ75 279 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-205ENST00000397761 HDHD3Q9BSH5 251 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms