RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SNX22Q96L94 193 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 NR1H4Q96RI1 486 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 TBX15Q96SF7 602 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 CHST6Q9GZX3 395 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 SIRPDQ9H106 197 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 NDUFB11Q9NX14 153 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 IL36GQ9NZH8 169 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 MRPS28Q9Y2Q9 187 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 KPTNQ9Y664 436 aa17.47■□□□□ 0.39
TSPAN4-206ENST00000397408 IGHV3OR16-10A0A075B7F0 116 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 MEGF11A6BM72 1044 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 PSPNO60542 156 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 IGHV4-38-2P0DP08 117 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 ZNF44P15621 663 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 RPL31P62899 125 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 SCGB2A2Q13296 93 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 CDH26Q8IXH8 852 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 KIR3DL3Q8N743 410 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 DMRTB1Q96MA1 342 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 SLITRK2Q9H156 845 aa17.46■□□□□ 0.39
TSPAN4-206ENST00000397408 CCRL2O00421 344 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 CSTBP04080 98 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 SRMP19623 302 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 SERPINA2P20848 420 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 EDDM3BP56851 147 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 SCN1BQ07699 218 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 EDDM3AQ14507 147 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 PDCD1Q15116 288 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 GRK1Q15835 563 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 PIGYQ3MUY2 71 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 SLC22A6Q4U2R8 563 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 AWAT2Q6E213 333 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 GDPD3Q7L5L3 318 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 LYPD6Q86Y78 171 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 CMTM4Q8IZR5 234 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 Q8NFD4 153 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 OR4S1Q8NGB4 309 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 OR4D6Q8NGJ1 314 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 NUP50Q9UKX7 468 aa17.45■□□□□ 0.38
TSPAN4-206ENST00000397408 CUBNO60494 3623 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 ARL6IP5O75915 188 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 TNFAIP8O95379 198 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 OR3A1P47881 315 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 IL13RA2Q14627 380 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 Q6P435 159 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 GLIPR1L1Q6UWM5 242 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 OR51T1Q8NGJ9 327 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 OR5D13Q8NGL4 314 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 PPP1R35Q8TAP8 253 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 UQCC2Q9BRT2 126 aa17.44■□□□□ 0.38
TSPAN4-206ENST00000397408 A0A1W2PP11 408 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 DEGS1O15121 323 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 ZNF780AO75290 641 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 NEDD8Q15843 81 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 GLT8D1Q68CQ7 371 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 VMO1Q7Z5L0 202 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 OSR2Q8N2R0 312 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 CHST4Q8NCG5 386 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 TBC1D15Q8TC07 691 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 C22orf15Q8WYQ4 148 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 PPA2Q9H2U2 334 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 OCEL1Q9H607 264 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 SIRT7Q9NRC8 400 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 ZNF69Q9UC07 566 aa17.43■□□□□ 0.38
TSPAN4-206ENST00000397408 M0R1W7 72 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 SLC33A1O00400 549 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 MGST3O14880 152 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 LMO1P25800 156 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 RBM11P57052 281 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 ZNF273Q14593 569 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 GPR157Q5UAW9 335 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 TMEM200BQ69YZ2 307 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 Q8N7P7 452 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 PCDHB16Q9NRJ7 776 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 ST3GAL6Q9Y274 331 aa17.42■□□□□ 0.38
TSPAN4-206ENST00000397408 A0A0G2JK05 382 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 GTF2F2P13984 249 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 BLMHQ13867 455 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 GPR176Q14439 515 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 NHLRC3Q5JS37 347 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 CD200R1LQ6Q8B3 271 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 BPIFB2Q8N4F0 458 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 TPRX1Q8N7U7 411 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 LHX4Q969G2 390 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 FOXRED1Q96CU9 486 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 C1orf147Q96MC9 270 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 SLC6A7Q99884 636 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 ATRQ13535 2644 aa17.41■□□□□ 0.38
TSPAN4-206ENST00000397408 A0A1W2PPH5 198 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 MEX3AA1L020 520 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 HSPB6O14558 160 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 CCL3L1P16619 93 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 DLX1P56177 255 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 PRB3Q04118 309 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 BRD3OSQ6XYD6 125 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 TSPAN14Q8NG11 270 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 MS4A7Q9GZW8 240 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 DSCAML1Q8TD84 2053 aa17.4■□□□□ 0.38
TSPAN4-206ENST00000397408 TRDV1A0A1B0GX56 115 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms