RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TRAPPC6BQ86SZ2 158 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 ENTHD1Q8IYW4 607 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF679Q8IYX0 411 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 STPG2Q8N412 459 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 IQCF1Q8N6M8 205 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 OR14K1Q8NGZ2 314 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 OR8U1Q8NH10 309 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 IL17DQ8TAD2 202 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 CORO2AQ92828 525 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 CDRT15Q96T59 188 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 CHST6Q9GZX3 395 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 GAL3ST2Q9H3Q3 398 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 DCLRE1BQ9H816 532 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF286AQ9HBT8 521 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 PCDHB16Q9NRJ7 776 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 TAS2R3Q9NYW6 316 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 GLS2Q9UI32 602 aa7.38□□□□□ -1.23
NEDD9-203ENST00000397378 SIRT4Q9Y6E7 314 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-203ENST00000397378 TRGV10A0A0A0MS01 117 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 A0A1B0GTI1 187 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 H3BN98 237 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 GABRR1P24046 479 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 PRDX6P30041 224 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 CDX1P47902 265 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-203ENST00000397378 INSL3P51460 131 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 RIDAP52758 137 aaKnown RBP7.37□□□□□ -1.23
NEDD9-203ENST00000397378 HCCSP53701 268 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 PRRX1P54821 245 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 ESRRGP62508 458 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 CBX1P83916 185 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 MFGE8Q08431 387 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF146Q15072 292 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 FAM27D1Q5T7N8 215 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 C16orf89Q6UX73 402 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 SLC35E3Q7Z769 313 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 CPOQ8IVL8 374 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 FOXRED2Q8IWF2 684 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 Q8IYB0 196 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 ELMOD2Q8IZ81 293 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 RNF152Q8N8N0 203 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 TRMT10AQ8TBZ6 339 aaKnown RBP7.37□□□□□ -1.23
NEDD9-203ENST00000397378 ASB17Q8WXJ9 295 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 NIPSNAP1Q9BPW8 284 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 CADM1Q9BY67 442 aaKnown RBP7.37□□□□□ -1.23
NEDD9-203ENST00000397378 MOB1AQ9H8S9 216 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 LINC00527Q9UJ94 153 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 SLC7A11Q9UPY5 501 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 TMEM14AQ9Y6G1 99 aa7.37□□□□□ -1.23
NEDD9-203ENST00000397378 PLECQ15149 4684 aaKnown RBP7.36□□□□□ -1.23
NEDD9-203ENST00000397378 IGKV1-27A0A075B6S5 117 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 TRBV2A0A0J9YWF9 115 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 FAM230AA0A1W2PPH8 454 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 FUOMA2VDF0 154 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 FAM172BPA6NC97 362 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 PRR32B1ATL7 298 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 LOC110117498-PIK3R3F6TDL0 507 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 CCRL2O00421 344 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 TOR1AO14656 332 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 HMGN1P05114 100 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 RPLP1P05386 114 aaKnown RBP7.36□□□□□ -1.23
NEDD9-203ENST00000397378 GDNFP39905 211 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 OR3A1P47881 315 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 CDC42P60953 191 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 FHL3Q13643 280 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 PNLIPRP3Q17RR3 467 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 OR2T5Q6IEZ7 315 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 LCNL1Q6ZST4 164 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 HDXQ7Z353 690 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 DRAM1Q8N682 238 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 DRAXINQ8NBI3 349 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-203ENST00000397378 OR2T29Q8NH02 315 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 EMG1Q92979 244 aaKnown RBP7.36□□□□□ -1.23
NEDD9-203ENST00000397378 SLAMF9Q96A28 289 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 RPEQ96AT9 228 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 RNFT2Q96EX2 444 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 GON7Q9BXV9 100 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 CCDC134Q9H6E4 229 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 REEP1Q9H902 201 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 IL36RNQ9UBH0 155 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 SAMHD1Q9Y3Z3 626 aaKnown RBP7.36□□□□□ -1.23
NEDD9-203ENST00000397378 U3KQV3 271 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 TNCP24821 2201 aa7.36□□□□□ -1.23
NEDD9-203ENST00000397378 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 A0A1W2PPI3 338 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 A6NIN4 97 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 AP4M1O00189 453 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 IFNA6P05013 189 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 TMEM11P17152 192 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 CCL1P22362 96 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 FUT6P51993 359 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 RPS7P62081 194 aaKnown RBP7.35□□□□□ -1.23
NEDD9-203ENST00000397378 CDK5Q00535 292 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 FOXE3Q13461 319 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 GK3PQ14409 553 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 GINS1Q14691 196 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 KPNB1Q14974 876 aaKnown RBP7.35□□□□□ -1.23
NEDD9-203ENST00000397378 UBE2V2Q15819 145 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 SPATS1Q496A3 300 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms