RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SNAPC5O75971 98 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 ZNF250P15622 560 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 SELEP16581 610 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 ZBTB25P24278 435 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 BLVRBP30043 206 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 H2BFSP57053 126 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 SELENOVP59797 346 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 SRSF4Q08170 494 aaKnown RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 PSG7Q13046 419 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 DHRS2Q13268 280 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 LGALSLQ3ZCW2 172 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 SCGB2B2Q4G0G5 96 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 C4orf46Q504U0 113 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 MRPL24Q96A35 216 aaKnown RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 MRPS24Q96EL2 167 aaKnown RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 PSMG3-AS1Q96PY0 264 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
CAPN3-207ENST00000397200 DUSP13Q9UII6 198 aa12.68□□□□□ -0.38
CAPN3-207ENST00000397200 FAM230AA0A1W2PPH8 454 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 PLSCR5A0PG75 271 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 CD300LBA8K4G0 201 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 TMEM225BP0DP42 221 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 ATP1B3P54709 279 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 KLF3P57682 345 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 IKZF1Q13422 519 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 ARFRP1Q13795 201 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 SLC7A5P1Q8MH63 180 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 CSNK2A3Q8NEV1 391 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 Q8NFD4 153 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 OR56B2PQ8NGI1 322 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 LILRB1Q8NHL6 650 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 SYT3Q9BQG1 590 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 SLC7A11Q9UPY5 501 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 PKDREJQ9NTG1 2253 aa12.67□□□□□ -0.38
CAPN3-207ENST00000397200 GCN1Q92616 2671 aaKnown RBP12.67□□□□□ -0.38
CAPN3-207ENST00000397200 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 F5H5P2 479 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 TIMM8AO60220 97 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 CST4P01036 141 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 PMP2P02689 132 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 CSN2P05814 226 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 OR4A8P0C604 315 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 HLA-GP17693 338 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 KITLGP21583 273 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 APOBEC3AP31941 199 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 TAS2R46P59540 309 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 UBE2MP61081 183 aaKnown RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 PDZK1IP1Q13113 114 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 ADIPOQQ15848 244 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 SIGIRRQ6IA17 410 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 LPCAT3Q6P1A2 487 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 LYG2Q86SG7 212 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 FTMTQ8N4E7 242 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 DHRS9Q9BPW9 319 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 MRPL37Q9BZE1 423 aaKnown RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 CHIAQ9BZP6 476 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 SLC23A1Q9UHI7 598 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 UTP20O75691 2785 aaKnown RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 GOSR2O14653 212 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 ANGPTL7O43827 346 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IGHV3-13P01766 116 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 IFNA6P05013 189 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 CHATP28329 748 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 RSU1Q15404 277 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 MOB3CQ70IA8 216 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 OR5M8Q8NGP6 311 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 TERB2Q8NHR7 220 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 EMG1Q92979 244 aaKnown RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 WDR89Q96FK6 387 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 PLK3Q9H4B4 646 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 ELL3Q9HB65 397 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-207ENST00000397200 ABCA4P78363 2273 aa12.66□□□□□ -0.38
CAPN3-207ENST00000397200 USP9YO00507 2555 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-207ENST00000397200 PQLC2LA1A4F0 135 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 FAM221AA4D161 298 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 ANKRD30BLA7E2S9 258 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 HTR3BO95264 441 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 CSTBP04080 98 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms