RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 RELBQ01201 579 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 DEFA6Q01524 100 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 DMRTC1Q5HYR2 192 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 C1orf100Q5SVJ3 147 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 RUSC1-AS1Q66K80 236 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 AWAT2Q6E213 333 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 ANGPTL5Q86XS5 388 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF573Q86YE8 665 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-202ENST00000396828 RNF170Q96K19 258 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 SPACA5Q96QH8 159 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 NUDT16L1Q9BRJ7 211 aaKnown RBP8.56□□□□□ -1.04
NEDD8-202ENST00000396828 CNTD2Q9H8S5 307 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 C14orf119Q9NWQ9 140 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 COMMD3Q9UBI1 195 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 CTSZQ9UBR2 303 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 GHRLQ9UBU3 117 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 MIOXQ9UGB7 285 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 MRPS28Q9Y2Q9 187 aaKnown RBP8.56□□□□□ -1.04
NEDD8-202ENST00000396828 ETV7Q9Y603 341 aa8.56□□□□□ -1.04
NEDD8-202ENST00000396828 WNK1Q9H4A3 2382 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 PQLC2LA1A4F0 135 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 TMEM210A6NLX4 147 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF732B4DXR9 585 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 BPNT1O95861 308 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 CYB5AP00167 134 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 SFTPBP07988 381 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 TMEM225BP0DP42 221 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 PTGFRP43088 359 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 PITPNBP48739 271 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 SRP9P49458 86 aaKnown RBP8.55□□□□□ -1.04
NEDD8-202ENST00000396828 GPM6AP51674 278 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 CLDN12P56749 244 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 KRTAP10-3P60369 221 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 FGF12P61328 243 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 P2RY14Q15391 338 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF181Q2M3W8 571 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 WDR25Q64LD2 544 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-202ENST00000396828 SFRP4Q6FHJ7 346 aaPredicted RBP8.55□□□□□ -1.04
NEDD8-202ENST00000396828 C16orf87Q6PH81 154 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 BTNL3Q6UXE8 466 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 SAMD12Q8N8I0 201 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 OR4D6Q8NGJ1 314 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 OR6Q1Q8NGQ2 317 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 TNFAIP8L1Q8WVP5 186 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 HPSE2Q8WWQ2 592 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 RFT1Q96AA3 541 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 FAM3DQ96BQ1 224 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 CMTM3Q96MX0 182 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 PPP1R3EQ9H7J1 279 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
NEDD8-202ENST00000396828 PCDHB16Q9NRJ7 776 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 SPATA2Q9UM82 520 aa8.55□□□□□ -1.04
NEDD8-202ENST00000396828 A0A0B4J203 849 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 FAM25AB3EWG3 89 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 FAM25CB3EWG5 89 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 FAM25GB3EWG6 89 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 CTDSP2O14595 271 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 HPGDSO60760 199 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 ZNF780AO75290 641 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 SNRPBP14678 240 aaKnown RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 TALDO1P37837 337 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 GATA4P43694 442 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 HAAOP46952 286 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 OR3A4PP47883 348 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 POU3F4P49335 361 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 IL13RA1P78552 427 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 LSAMPQ13449 338 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 GPR176Q14439 515 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 RSU1Q15404 277 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 FAM189A2Q15884 450 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 C2orf76Q3KRA6 126 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 PDLIM3Q53GG5 364 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 UBE2NLQ5JXB2 153 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 GLIPR1L1Q6UWM5 242 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 LYPD6Q86Y78 171 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 MKXQ8IYA7 352 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 FGFRL1Q8N441 504 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 ZSCAN4Q8NAM6 433 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 OR51D1Q8NGF3 324 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 OR8B3Q8NGG8 313 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 OR5D18Q8NGL1 313 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 TBC1D15Q8TC07 691 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 LGALS14Q8TCE9 139 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 S100ZQ8WXG8 99 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 OR8B2Q96RD0 313 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 TBX15Q96SF7 602 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 CST11Q9H112 138 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 METTL9Q9H1A3 318 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 PRDM13Q9H4Q3 707 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 ELL3Q9HB65 397 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-202ENST00000396828 CLN8Q9UBY8 286 aa8.54□□□□□ -1.04
NEDD8-202ENST00000396828 ING4Q9UNL4 249 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms