RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RPP21Q9H633 154 aaKnown RBP3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF430Q9H8G1 570 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 REEP1Q9H902 201 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 IFT46Q9NQC8 304 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 INIPQ9NRY2 104 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 TRMT112Q9UI30 125 aaKnown RBP3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF391Q9UJN7 358 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 FBXO5Q9UKT4 447 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF257Q9Y2Q1 563 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 SNX24Q9Y343 169 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 SNX10Q9Y5X0 201 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 PTPRTO14522 1441 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 KIAA0232Q92628 1395 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 CEP350Q5VT06 3117 aa3.24□□□□□ -1.89
HMGB1P10-201ENST00000395823 IQSEC2Q5JU85 1478 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 IGHV3OR16-9A0A0B4J2B5 98 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 C21orf140B9A014 251 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ANKRD63C9JTQ0 380 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 F5H768 121 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 K7EN84 100 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 CXCR6O00574 342 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 BET1O15155 118 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 FABP7O15540 132 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 FGF16O43320 207 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 KLRC4O43908 158 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ENTPD6O75354 484 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 MPZL1O95297 269 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 CD5P06127 495 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR8U9P0C7N5 309 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 LIMS3P0CW19 117 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 LIMS4P0CW20 117 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ADRB3P13945 408 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 KCNE1P15382 129 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF823P16415 610 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 HTR1DP28221 377 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 SRP9P49458 86 aaKnown RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 SULT1A1P50225 295 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 SULT1A2P50226 295 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF133P52736 654 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 TMEM33P57088 247 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 RAB25P57735 213 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 UBE2NP61088 152 aaKnown RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 PAFAH1B2P68402 229 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 WHAMMP3Q1A5X7 153 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 HBMQ6B0K9 141 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 MED27Q6P2C8 311 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 SLC36A1Q7Z2H8 476 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR8U1Q8NH10 309 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 PIFOQ8TCI5 191 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 DCPSQ96C86 337 aaKnown RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZHX1-C8orf76Q96EF9 292 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 IMP4Q96G21 291 aaKnown RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 BTF3L4Q96K17 158 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 RBP7Q96R05 134 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 NUDT9Q9BW91 350 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 BOLA2Q9H3K6 86 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 C11orf49Q9H6J7 331 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 EXOSC4Q9NPD3 245 aaKnown RBP3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 RGS18Q9NS28 235 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 FAM49BQ9NUQ9 324 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 TAS2R1Q9NYW7 299 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 ACOT9Q9Y305 439 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 LAMC3Q9Y6N6 1575 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 FLT4P35916 1363 aa3.23□□□□□ -1.89
HMGB1P10-201ENST00000395823 GAPVD1Q14C86 1478 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 WDR7Q9Y4E6 1490 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 TSPOAP1O95153 1857 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 CHD1O14646 1710 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 H0Y9J4 135 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 DNASE2O00115 360 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 ANGPTL7O43827 346 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 MPZL2O60487 215 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 CST8O60676 142 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 APOC1P02654 83 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 NBEAP1P0C6P0 100 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 MPIP34949 423 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 TTPAP49638 278 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 CDKN2DP55273 166 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SYNJ2BPP57105 145 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 RANP62826 216 aaKnown RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 BTN3A2P78410 334 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 TRAM1Q15629 374 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 TBC1D28Q2M2D7 210 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 ORMDL2Q53FV1 153 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 AVPI1Q5T686 147 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 DHRS4L2Q6PKH6 230 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 IGFL2Q6UWQ7 119 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 CYHR1Q6ZMK1 362 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 STX19Q8N4C7 294 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR8G5Q8NG78 346 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR1M1Q8NGA1 313 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR10X1Q8NGY0 326 aa3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 SRSF12Q8WXF0 261 aaKnown RBP3.22□□□□□ -1.89
HMGB1P10-201ENST00000395823 C12orf43Q96C57 262 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms