RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 WDYHV1Q96HA8 205 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 RSRP1Q9BUV0 290 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 ZNF629Q9UEG4 869 aaPredicted RBP12.03□□□□□ -0.48
SNCA-204ENST00000394989 ST3GAL6Q9Y274 331 aa12.03□□□□□ -0.48
SNCA-204ENST00000394989 RRP8O43159 456 aaKnown RBP12.02□□□□□ -0.48
SNCA-204ENST00000394989 CRHP06850 196 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 CD79AP11912 226 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 RAB1AP62820 205 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.48
SNCA-204ENST00000394989 VASH2Q86V25 355 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 ZNF611Q8N823 705 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 DEFB124Q8NES8 71 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 SLC25A32Q9H2D1 315 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 C12orf49Q9H741 205 aa12.02□□□□□ -0.48
SNCA-204ENST00000394989 C5orf51A6NDU8 294 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 CDRT15L2A8MXV6 281 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 ZNF205O95201 554 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 FCGR3AP08637 254 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 PPT1P50897 306 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 ARG2P78540 354 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 ZNF766Q5HY98 468 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 ZNF600Q6ZNG1 722 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 POM121L2Q96KW2 1035 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
SNCA-204ENST00000394989 GSN-AS1Q9NRJ2 163 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 MBD2Q9UBB5 411 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 A0A0D9SG52 128 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 SPAARA0A1B0GVQ0 90 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 IL18BPO95998 194 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 COX5BP10606 129 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 BHLHE23Q8NDY6 225 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 TMED6Q8WW62 240 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 HPSE2Q8WWQ2 592 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
SNCA-204ENST00000394989 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 DECR2Q9NUI1 292 aa12.02□□□□□ -0.49
SNCA-204ENST00000394989 KLF2Q9Y5W3 355 aaPredicted RBP12.02□□□□□ -0.49
SNCA-204ENST00000394989 A0A0B4J2A0 478 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 FAM221AA4D161 298 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 OR2F2O95006 317 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 PTGER4P35408 488 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 HAAOP46952 286 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 PMP22Q01453 160 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 OR2F1Q13607 317 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 SMCO1Q147U7 214 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 NSUN5P2Q63ZY6 315 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 GLYATL2Q8WU03 294 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 SCGB3A2Q96PL1 93 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 NMES1Q9C002 83 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 ZDHHC11Q9H8X9 412 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 SHPKQ9UHJ6 478 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 PQLC2LA1A4F0 135 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 NKX2-8O15522 239 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 KNG1P01042 644 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 FTH1P19P0C7X4 201 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 RBM11P57052 281 aaKnown RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 SOX8P57073 446 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 SURF2Q15527 256 aaPredicted RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 HIKESHIQ53FT3 197 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 AVPI1Q5T686 147 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 RNF126Q9BV68 326 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 PARP12Q9H0J9 701 aaKnown RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 BARX1Q9HBU1 254 aaPredicted RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 CHMP1AQ9HD42 196 aaPredicted RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 MIOXQ9UGB7 285 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 ZNF292O60281 2723 aa12.01□□□□□ -0.49
SNCA-204ENST00000394989 TNRC6AQ8NDV7 1962 aaKnown RBP12.01□□□□□ -0.49
SNCA-204ENST00000394989 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
SNCA-204ENST00000394989 H0YIZ8 118 aa12□□□□□ -0.49
SNCA-204ENST00000394989 PSMB6P28072 239 aa12□□□□□ -0.49
SNCA-204ENST00000394989 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
SNCA-204ENST00000394989 OR10C1Q96KK4 312 aa12□□□□□ -0.49
SNCA-204ENST00000394989 RAB18Q9NP72 206 aa12□□□□□ -0.49
SNCA-204ENST00000394989 TRGV5A0A0B4J1U4 118 aa12□□□□□ -0.49
SNCA-204ENST00000394989 F8VVB4 439 aa12□□□□□ -0.49
SNCA-204ENST00000394989 F8VWA3 439 aa12□□□□□ -0.49
SNCA-204ENST00000394989 LY86O95711 162 aa12□□□□□ -0.49
SNCA-204ENST00000394989 OR5H8P0DN80 308 aa12□□□□□ -0.49
SNCA-204ENST00000394989 DTYMKP23919 212 aa12□□□□□ -0.49
SNCA-204ENST00000394989 TNFSF10P50591 281 aa12□□□□□ -0.49
SNCA-204ENST00000394989 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
SNCA-204ENST00000394989 PRDX4Q13162 271 aa12□□□□□ -0.49
SNCA-204ENST00000394989 CLINT1Q14677 625 aa12□□□□□ -0.49
SNCA-204ENST00000394989 MCEMP1Q8IX19 187 aa12□□□□□ -0.49
SNCA-204ENST00000394989 ISOC2Q96AB3 205 aa12□□□□□ -0.49
SNCA-204ENST00000394989 HS3ST6Q96QI5 342 aa12□□□□□ -0.49
SNCA-204ENST00000394989 ASCL3Q9NQ33 180 aa12□□□□□ -0.49
SNCA-204ENST00000394989 BCL2L11O43521 198 aa12□□□□□ -0.49
SNCA-204ENST00000394989 WISP2O76076 250 aa12□□□□□ -0.49
SNCA-204ENST00000394989 WT1P19544 449 aaPredicted RBP12□□□□□ -0.49
SNCA-204ENST00000394989 C9orf152Q5JTZ5 239 aa12□□□□□ -0.49
SNCA-204ENST00000394989 EIF4E3Q8N5X7 224 aaKnown RBP12□□□□□ -0.49
SNCA-204ENST00000394989 Q8NFD4 153 aa12□□□□□ -0.49
SNCA-204ENST00000394989 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
SNCA-204ENST00000394989 C20orf24Q9BUV8 137 aa12□□□□□ -0.49
SNCA-204ENST00000394989 MEX3AA1L020 520 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms