RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CALRP27797 417 aaKnown RBP16.41■□□□□ 0.22
SNCA-203ENST00000394986 PRB3Q04118 309 aaPredicted RBP16.41■□□□□ 0.22
SNCA-203ENST00000394986 C11orf91Q3C1V1 193 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 AWAT2Q6E213 333 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 Q6P435 159 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 GLIPR1L1Q6UWM5 242 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 OR4S1Q8NGB4 309 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 PHYHIPQ92561 330 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 UPRTQ96BW1 309 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 WDFY2Q96P53 400 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 TBX15Q96SF7 602 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 S100A13Q99584 98 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 FAM234AQ9H0X4 552 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 SIRPDQ9H106 197 aa16.41■□□□□ 0.22
SNCA-203ENST00000394986 TRAV40A0A0B4J280 105 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 SH2D1BO14796 132 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 TOX4O94842 621 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 LIPFP07098 398 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 ZNF44P15621 663 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 OR3A1P47881 315 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 DLX1P56177 255 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 EDDM3AQ14507 147 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 SLC22A6Q4U2R8 563 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 METTL11BQ5VVY1 283 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 METAP1DQ6UB28 335 aaPredicted RBP16.4■□□□□ 0.22
SNCA-203ENST00000394986 OR8H2Q8N162 312 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 TPRX1Q8N7U7 411 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 C22orf15Q8WYQ4 148 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 SNX22Q96L94 193 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 C1orf147Q96MC9 270 aaPredicted RBP16.4■□□□□ 0.22
SNCA-203ENST00000394986 GFI1Q99684 422 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 IL36GQ9NZH8 169 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 GLS2Q9UI32 602 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 MXRA5Q9NR99 2828 aa16.4■□□□□ 0.22
SNCA-203ENST00000394986 TRBV23-1A0A0A0MS06 115 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 MEGF11A6BM72 1044 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 ARL6IP5O75915 188 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 EPHA1P21709 976 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 EDDM3BP56851 147 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 RPL31P62899 125 aaKnown RBP16.39■□□□□ 0.21
SNCA-203ENST00000394986 GRK1Q15835 563 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 CD200R1LQ6Q8B3 271 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 CDH26Q8IXH8 852 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 OSR2Q8N2R0 312 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 Q8NFD4 153 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 TSPAN14Q8NG11 270 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 OR51T1Q8NGJ9 327 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 SLITRK2Q9H156 845 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 PPA2Q9H2U2 334 aa16.39■□□□□ 0.21
SNCA-203ENST00000394986 SEBOXQ9HB31 216 aaPredicted RBP16.39■□□□□ 0.21
SNCA-203ENST00000394986 DOCK11Q5JSL3 2073 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 CSTBP04080 98 aaKnown RBP16.38■□□□□ 0.21
SNCA-203ENST00000394986 BMXP51813 675 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 ZNF273Q14593 569 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 GDPD3Q7L5L3 318 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 TEX29Q8N6K0 151 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 Q8N7P7 452 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 UQCC2Q9BRT2 126 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 SIRT7Q9NRC8 400 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 ST3GAL6Q9Y274 331 aa16.38■□□□□ 0.21
SNCA-203ENST00000394986 AK6Q9Y3D8 172 aaKnown RBP16.38■□□□□ 0.21
SNCA-203ENST00000394986 SOX21Q9Y651 276 aaPredicted RBP16.38■□□□□ 0.21
SNCA-203ENST00000394986 A0A0G2JK05 382 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 SHISA3A0PJX4 238 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 SLC33A1O00400 549 aaPredicted RBP16.37■□□□□ 0.21
SNCA-203ENST00000394986 HSPB6O14558 160 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 DEGS1O15121 323 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 RBM11P57052 281 aaKnown RBP16.37■□□□□ 0.21
SNCA-203ENST00000394986 SYT6Q5T7P8 510 aaPredicted RBP16.37■□□□□ 0.21
SNCA-203ENST00000394986 GLT8D1Q68CQ7 371 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 TMEM200BQ69YZ2 307 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 VMO1Q7Z5L0 202 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 PDZD9Q8IXQ8 264 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 TBC1D15Q8TC07 691 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 KCNK15Q9H427 330 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 BANF2Q9H503 90 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 ING3Q9NXR8 418 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 ZNF69Q9UC07 566 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 NUP50Q9UKX7 468 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 KPTNQ9Y664 436 aa16.37■□□□□ 0.21
SNCA-203ENST00000394986 A0A087WXM4 84 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 TRDV1A0A1B0GX56 115 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 GEMIN2O14893 280 aaKnown RBP16.36■□□□□ 0.21
SNCA-203ENST00000394986 CCL3L1P16619 93 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 LMO1P25800 156 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 IL13RA2Q14627 380 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 ATXN7L3Q14CW9 347 aaPredicted RBP16.36■□□□□ 0.21
SNCA-203ENST00000394986 C22orf42Q6IC83 251 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 BRD3OSQ6XYD6 125 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 KIR3DL3Q8N743 410 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 TMEM104Q8NE00 496 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 LHX4Q969G2 390 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 TRAV24A0A0B4J272 114 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 MGST3O14880 152 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 ZNF780AO75290 641 aaPredicted RBP16.36■□□□□ 0.21
SNCA-203ENST00000394986 ERVFRD-1P60508 538 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 SRSF2Q01130 221 aaKnown RBP16.36■□□□□ 0.21
SNCA-203ENST00000394986 KLRD1Q13241 179 aa16.36■□□□□ 0.21
SNCA-203ENST00000394986 C1orf100Q5SVJ3 147 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms