RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RNF126Q9BV68 326 aa12.87□□□□□ -0.35
GPC3-202ENST00000394299 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
GPC3-202ENST00000394299 CDH20Q9HBT6 801 aa12.87□□□□□ -0.35
GPC3-202ENST00000394299 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
GPC3-202ENST00000394299 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
GPC3-202ENST00000394299 LINC00862A6NCI5 91 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 FGL1Q08830 312 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 CLLU1Q5K131 121 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 ELP2Q6IA86 826 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 OR1J1Q8NGS3 322 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 ASB13Q8WXK3 278 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 RDH5Q92781 318 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 APC2O95996 2303 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
GPC3-202ENST00000394299 TNFSF13O75888 250 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 RLN2P04090 185 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 SCTP09683 121 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 SLC25A4P12235 298 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 C4BPBP20851 252 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 PSMB6P28072 239 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 MPV17P39210 176 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 UCP2P55851 309 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 PIGPP57054 158 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 GNG3P63215 75 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 TMEM65Q6PI78 240 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
GPC3-202ENST00000394299 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
GPC3-202ENST00000394299 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 WNT2BQ93097 391 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 OR51I2Q9H344 312 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 ZNF286AQ9HBT8 521 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
GPC3-202ENST00000394299 SMG1Q96Q15 3661 aaKnown RBP12.86□□□□□ -0.35
GPC3-202ENST00000394299 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 PSG7Q13046 419 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 TMEM211Q6ICI0 200 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 DPPA2Q7Z7J5 298 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 OR5T2Q8NGG2 359 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 GPHA2Q96T91 129 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 DECR2Q9NUI1 292 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 TRAV39A0A0B4J263 110 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 IFNA2P01563 188 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 CTSDP07339 412 aaPredicted RBP12.85□□□□□ -0.35
GPC3-202ENST00000394299 AADACP22760 399 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
GPC3-202ENST00000394299 PLEKHN1Q494U1 663 aaPredicted RBP12.85□□□□□ -0.35
GPC3-202ENST00000394299 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 SAXO1Q8IYX7 474 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 OR6K3Q8NGY3 331 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 RRNAD1Q96FB5 475 aaKnown RBP12.85□□□□□ -0.35
GPC3-202ENST00000394299 RAB18Q9NP72 206 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 OR5AC2Q9NZP5 309 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
GPC3-202ENST00000394299 BET1O15155 118 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 WDR1O75083 606 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 RAB14P61106 215 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 ESCO2Q56NI9 601 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 FAM74A1Q5RGS3 127 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 COMMD7Q86VX2 200 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 RBMXL3Q8N7X1 1067 aaKnown RBP12.84□□□□□ -0.35
GPC3-202ENST00000394299 SUMF2Q8NBJ7 301 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 CRYM-AS1A6NIL9 109 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 CDIPTO14735 213 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 RAB32Q13637 225 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 RBM39Q14498 530 aaKnown RBP12.84□□□□□ -0.35
GPC3-202ENST00000394299 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 DCUN1D4Q92564 292 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
GPC3-202ENST00000394299 NMES1Q9C002 83 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
GPC3-202ENST00000394299 MSGN1A6NI15 193 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 AHRRA9YTQ3 701 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 GRPP07492 148 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 HERPUD1Q15011 391 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 INO80CQ6PI98 192 aaPredicted RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 UNQ6126/PRO20091Q6UXV3 157 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 FAM58AQ8N1B3 248 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 SCCPDHQ8NBX0 429 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 KLF14Q8TD94 323 aaPredicted RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 Q9N2K0 584 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 RCC2Q9P258 522 aaKnown RBP12.83□□□□□ -0.36
GPC3-202ENST00000394299 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
GPC3-202ENST00000394299 CEP295Q9C0D2 2601 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms