RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NPFFO15130 113 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 PIN1P1O15428 100 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MAGEB3O15480 346 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 IGHV4-59P01825 116 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MAS1P04201 325 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 CD2P06729 351 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MELTFP08582 738 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 IGFBP3P17936 291 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 BDKRB2P30411 391 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 BMXP51813 675 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 PPP3R1P63098 170 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 RIPK1Q13546 671 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 IRF3Q14653 427 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 ATXN7L3Q14CW9 347 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF146Q15072 292 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MED22Q15528 200 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 C11orf91Q3C1V1 193 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 PIGYQ3MUY2 71 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 Q499Y3 187 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 YIF1BQ5BJH7 314 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM27D1Q5T7N8 215 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 FIP1L1Q6UN15 594 aaKnown RBP6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 GDPD3Q7L5L3 318 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 Q8IYB0 196 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR8H2Q8N162 312 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 C11orf42Q8N5U0 333 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 SPATA3Q8NHX4 192 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM216AQ8WUB2 273 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MYDGFQ969H8 173 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 CYYR1Q96J86 154 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 JMJD8Q96S16 334 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF184Q99676 751 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMED9Q9BVK6 235 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MND1Q9BWT6 205 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 CDCA4Q9BXL8 241 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM234AQ9H0X4 552 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 PPA2Q9H2U2 334 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 EXOSC4Q9NPD3 245 aaKnown RBP6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 NOX4Q9NPH5 578 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 SCN3BQ9NY72 215 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 ING4Q9UNL4 249 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A0G2JK05 382 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM172BPA6NC97 362 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SLC33A1O00400 549 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 RGS10O43665 173 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 ALX3O95076 343 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 HTR3BO95264 441 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 RNASE1P07998 156 aaKnown RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 HSMCR30P0CW71 290 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF44P15621 663 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SERPINA2P20848 420 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 PRTN3P24158 256 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 CRHBPP24387 322 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SAA4P35542 130 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF93P35789 620 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TGFBR2P37173 567 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 VHLP40337 213 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 GLIPR1P48060 266 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 GP2P55259 537 aaKnown RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 DLX6P56179 175 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TAS2R43P59537 309 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 AESQ08117 197 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 BLMHQ13867 455 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 RSU1Q15404 277 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SPHARQ15513 63 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SPIN3Q5JUX0 258 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 LIPKQ5VXJ0 399 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 Q6P435 159 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 BAIAP2L2Q6UXY1 529 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 Q6YL49 198 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SAXO1Q8IYX7 474 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 JAGN1Q8N5M9 183 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZSCAN4Q8NAM6 433 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM203Q969S6 136 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 MUL1Q969V5 352 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 SNX22Q96L94 193 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 DERL3Q96Q80 235 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 CHIAQ9BZP6 476 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 PPIL3Q9H2H8 161 aaKnown RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 DUSP21Q9H596 190 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 METTL8Q9H825 291 aaKnown RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM138Q9NPI0 162 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 CKLFQ9UBR5 152 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 RRP15Q9Y3B9 282 aaKnown RBP6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TPRKBQ9Y3C4 175 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 TENM1Q9UKZ4 2725 aa6.26□□□□□ -1.41
HMGB3P1-201ENST00000393368 WNK2Q9Y3S1 2297 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 TRAV24A0A0B4J272 114 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 C17orf98A8MV24 154 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 SH2D1BO14796 132 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 DEGS1O15121 323 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 MMP23AO75900 390 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 ALDOBP05062 364 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF728P0DKX0 622 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 FSTP19883 344 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 OMGP23515 440 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 EEF1B2P24534 225 aaKnown RBP6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 GDNFP39905 211 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 PTGFRP43088 359 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms