RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 FAM221AA4D161 298 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 JTBO76095 146 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 CD59P13987 128 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 RFC3P40938 356 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 MAGEA5P43359 124 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 PRDX4Q13162 271 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 OR2A2Q6IF42 318 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 CCDC71LQ8N9Z2 235 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 OR56B2PQ8NGI1 322 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 MSI2Q96DH6 328 aaKnown RBP12.88□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF442Q9H7R0 627 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 DCAF16Q9NXF7 216 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 AMDHD2Q9Y303 409 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
SCFD2-201ENST00000388940 E5RGE8 158 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 SP9P0CG40 484 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 ARR3P36575 388 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 NPBWR2P48146 333 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 FXYD4P59646 89 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 CEACAM21Q3KPI0 293 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 LGI3Q8N145 548 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 CLRN3Q8NCR9 226 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 IP6K3Q96PC2 410 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 PAPOLGQ9BWT3 736 aaKnown RBP12.87□□□□□ -0.35
SCFD2-201ENST00000388940 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
SCFD2-201ENST00000388940 CARHSP1Q9Y2V2 147 aaKnown RBP12.87□□□□□ -0.35
SCFD2-201ENST00000388940 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 CFAP54Q96N23 3096 aa12.87□□□□□ -0.35
SCFD2-201ENST00000388940 A0A096LPE4 126 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 FAM166BA8MTA8 275 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SIGLEC5O15389 551 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SNAPINO95295 136 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 HLA-HP01893 362 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 ITGA3P26006 1051 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SULT1A2P50226 295 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 FGF12P61328 243 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 PLA2G2CQ5R387 149 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SVBPQ8N300 66 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 APH1AQ96BI3 265 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 PRRG4Q9BZD6 226 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SAV1Q9H4B6 383 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 OPA3Q9H6K4 179 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 C5orf49A4QMS7 147 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 LRP3O75074 770 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 PDCD1Q15116 288 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 SP6Q3SY56 376 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 MRPL21Q7Z2W9 205 aaKnown RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 ZDHHC23Q8IYP9 409 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 HPSE2Q8WWQ2 592 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 FGF23Q9GZV9 251 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-201ENST00000388940 ZDBF2Q9HCK1 2354 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF205O95201 554 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 MT-CO3P00414 261 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 ADCYAP1P18509 176 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 BCL3P20749 454 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 AADACP22760 399 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 DUSP1P28562 367 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 FOXG1P55316 489 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-201ENST00000388940 TMEM33P57088 247 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 HERV-K104P61576 105 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 MPV17LQ2QL34 196 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 PHLDA2Q53GA4 152 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 LYZL2Q7Z4W2 148 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 EXTL1Q92935 676 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 POM121L2Q96KW2 1035 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 ARV1Q9H2C2 271 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 RCC2Q9P258 522 aaKnown RBP12.85□□□□□ -0.35
SCFD2-201ENST00000388940 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 NAPSAO96009 420 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 PPYP01298 95 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 SP1P08047 785 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
SCFD2-201ENST00000388940 CCNOP22674 350 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 CAV2P51636 162 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 GPR157Q5UAW9 335 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 C9orf135Q5VTT2 229 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
SCFD2-201ENST00000388940 OR5A2Q8NGI9 324 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms