RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TPBGLP0DKB5 382 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NCF1P14598 390 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CD36P16671 472 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF30P17039 623 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TCN1P20061 433 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TAC1P20366 129 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 BLVRBP30043 206 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SLC6A1P30531 599 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCR1P32246 355 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 PRSS3P35030 304 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SLC26A3P40879 764 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 GNPDA1P46926 289 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPC3P51654 580 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 LCN2P80188 198 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBE3AQ05086 875 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SULT2A1Q06520 285 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CXCL9Q07325 125 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 BNIP2Q12982 314 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 HSPB3Q12988 150 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NAB1Q13506 487 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 EDDM3AQ14507 147 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 PDK3Q15120 406 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TSTQ16762 297 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 C18orf21Q32NC0 220 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 LINC00303Q3SY05 128 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC38Q502W7 563 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SLC39A12Q504Y0 691 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC184Q52MB2 194 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CFAP157Q5JU67 520 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 GLYATL3Q5SZD4 288 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 C10orf62Q5T681 223 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NIPAL1Q6NVV3 410 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 WDR88Q6ZMY6 472 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 PRPF39Q86UA1 669 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2L13Q8N349 312 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 C15orf54Q8N8G6 183 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCDC54Q8NEL0 328 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR4M1Q8NGD0 313 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR5D18Q8NGL1 313 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR5C1Q8NGR4 320 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR9A4Q8NGU2 314 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NCOA7Q8NI08 942 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SUN5Q8TC36 379 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM37Q8WXS4 190 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPS31Q92665 395 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 NCLNQ969V3 563 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CMBLQ96DG6 245 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPS24Q96EL2 167 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CARD19Q96LW7 228 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CNBD2Q96M20 576 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZFP3Q96NJ6 502 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANKRD2Q9GZV1 360 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 C20orf85Q9H1P6 137 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 PLCB1Q9NQ66 1216 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TAS2R7Q9NYW3 318 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 TREM2Q9NZC2 230 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 CLEC2DQ9UHP7 191 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 SH3BGRL2Q9UJC5 107 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 POLDIP2Q9Y2S7 368 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRRC42Q9Y546 428 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 INSIG2Q9Y5U4 225 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 ATP7BP35670 1465 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 LMO7Q8WWI1 1683 aa-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYO5AQ9Y4I1 1855 aaKnown RBP-1.84□□□□□ -2.7
RNU6-540P-201ENST00000384622 FLT4P35916 1363 aa-1.85□□□□□ -2.7
RNU6-540P-201ENST00000384622 CEMIPQ8WUJ3 1361 aa-1.85□□□□□ -2.7
RNU6-540P-201ENST00000384622 PIK3R4Q99570 1358 aa-1.85□□□□□ -2.7
RNU6-540P-201ENST00000384622 CASP8AP2Q9UKL3 1982 aa-1.85□□□□□ -2.7
RNU6-540P-201ENST00000384622 HEATR1Q9H583 2144 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ANKRD31Q8N7Z5 1873 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCDC196A0A1B0GTZ2 297 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 DHRS12A0PJE2 317 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TVP23AA6NH52 213 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 A6NLC8 198 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 LYRM9A8MSI8 78 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 A8MXE2 369 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 B4E171 279 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 INS-IGF2F8WCM5 200 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NPIPA3F8WFD2 350 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 JMJD7-PLA2G4BH0Y9G9 81 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 H3BTX0 84 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 AP3B1O00203 1094 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 XRCC2O43543 280 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAPPC3O43617 180 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SPAG6O75602 509 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NRASP01111 189 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 BPGMP07738 259 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 FAM86B2P0C5J1 330 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 HSPA1AP0DMV8 641 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 HSPA1BP0DMV9 641 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CD28P10747 220 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PSMA1P25786 263 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ALDH3A1P30838 453 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SRD5A2P31213 254 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 COPB2P35606 906 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CXCL12P48061 93 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 MRPL19P49406 292 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PPT1P50897 306 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CNN1P51911 297 aaKnown RBP-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms