RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GADD45AP24522 165 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 CAPZA1P52907 286 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 SNU13P55769 128 aaKnown RBP15.49■□□□□ 0.07
SSU72-203ENST00000378725 SLC22A6Q4U2R8 563 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 C1orf229Q6ZS94 237 aaPredicted RBP15.49■□□□□ 0.07
SSU72-203ENST00000378725 CHST4Q8NCG5 386 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 OR5D13Q8NGL4 314 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 SLC25A28Q96A46 364 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 MRPS26Q9BYN8 205 aaKnown RBP15.49■□□□□ 0.07
SSU72-203ENST00000378725 C7orf69Q9H7B7 122 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 V9GY05 133 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 MALRD1Q5VYJ5 2156 aa15.49■□□□□ 0.07
SSU72-203ENST00000378725 A0A0G2JK05 382 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 A0A1W2PP11 408 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 SLC17A2O00624 439 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 PDCD5O14737 125 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 DEGS1O15121 323 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 CRLF1O75462 422 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 SERPINA2P20848 420 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 MYL9P24844 172 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 HTR2CP28335 458 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 PIGYQ3MUY2 71 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 GDPGP1Q6ZNW5 385 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 OR8H2Q8N162 312 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 ASCC1Q8N9N2 400 aaKnown RBP15.48■□□□□ 0.07
SSU72-203ENST00000378725 OR6M1Q8NGM8 313 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 CHCHD6Q9BRQ6 235 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 IFT22Q9H7X7 185 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 LPAR3Q9UBY5 353 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 CDC42EP3Q9UKI2 254 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 ST3GAL6Q9Y274 331 aa15.48■□□□□ 0.07
SSU72-203ENST00000378725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSU72-203ENST00000378725 TRBV23-1A0A0A0MS06 115 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 PPIAL4GP0DN37 164 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 CFPP27918 469 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 RBM11P57052 281 aaKnown RBP15.47■□□□□ 0.07
SSU72-203ENST00000378725 PDCD1Q15116 288 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 LINC00596Q86U02 117 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 TPRA1Q86W33 373 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 OR4S1Q8NGB4 309 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 OR13F1Q8NGS4 319 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 PPP1R35Q8TAP8 253 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 H1FXQ92522 213 aaKnown RBP15.47■□□□□ 0.07
SSU72-203ENST00000378725 MRI1Q9BV20 369 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 AUP1Q9Y679 476 aa15.47■□□□□ 0.07
SSU72-203ENST00000378725 SIRPB1O00241 398 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 SLC33A1O00400 549 aaPredicted RBP15.46■□□□□ 0.07
SSU72-203ENST00000378725 VSIG8P0DPA2 414 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 ZNF44P15621 663 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 RAB3BP20337 219 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 GABRR1P24046 479 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 RANBP1P43487 201 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 OR3A1P47881 315 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 QRFPP83859 136 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 SCN1BQ07699 218 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 TIMM50Q3ZCQ8 353 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 TMEM104Q8NE00 496 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 POM121Q96HA1 1249 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 KCTD7Q96MP8 289 aa15.46■□□□□ 0.07
SSU72-203ENST00000378725 TRAV24A0A0B4J272 114 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 MGST3O14880 152 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 GEMIN2O14893 280 aaKnown RBP15.45■□□□□ 0.06
SSU72-203ENST00000378725 BPNT1O95861 308 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 TFAP2AP05549 437 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 MGMTP16455 207 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 HNF1AP20823 631 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 ERP29P30040 261 aaKnown RBP15.45■□□□□ 0.06
SSU72-203ENST00000378725 ALDH3B2P48448 385 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 OR10A3P58181 314 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 GRK1Q15835 563 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 RAB11BQ15907 218 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 MPV17LQ2QL34 196 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 NR2C2APQ86WQ0 139 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 TEX29Q8N6K0 151 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 CENPOQ9BU64 300 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 BEX2Q9BXY8 128 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 BANF2Q9H503 90 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 RNF167Q9H6Y7 350 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 PLGRKTQ9HBL7 147 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 C19orf12Q9NSK7 152 aa15.45■□□□□ 0.06
SSU72-203ENST00000378725 ARHGAP32A7KAX9 2087 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 LOC100506127A0A0U1RQW1 187 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A10PA6NDY2 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A18PA6NE21 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A16PA6NEW6 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A20PA6NIJ5 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A8PA6NJQ4 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A7PA6NKC0 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 IFITM5A6NNB3 132 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A22PA8MWA6 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 TMEM14DPA8MWL7 114 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A12PA8MX19 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A5PA8MXJ8 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A23PA8MXZ1 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 CRTAPO75718 401 aaPredicted RBP15.44■□□□□ 0.06
SSU72-203ENST00000378725 CSN2P05814 226 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A15PP0C7V4 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A13PP0C7W8 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A14PP0C7W9 464 aa15.44■□□□□ 0.06
SSU72-203ENST00000378725 FAM90A24PP0C7X0 464 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms