RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 VSIG10L2P0DP72 767 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 GABRA1P14867 456 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 EDARADDQ8WWZ3 215 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 MSL2Q9HCI7 577 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 GPR27Q9NS67 375 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 STARD10Q9Y365 291 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 A0A087WV48 116 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 DNPH1O43598 174 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 MPGP29372 298 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 CFHR1Q03591 330 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 MPPED2Q15777 294 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 DCAF12L2Q5VW00 463 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 S1PR3Q99500 378 aa11.54□□□□□ -0.56
NPHP4-203ENST00000378169 C3orf85A0A1B0GTC6 90 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 M0R1X1 148 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 CRHP06850 196 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ZNF17P17021 662 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 BCL3P20749 454 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPHP4-203ENST00000378169 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
NPHP4-203ENST00000378169 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 C19orf48Q6RUI8 117 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 WDSUB1Q8N9V3 476 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ASB13Q8WXK3 278 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 CHRNA10Q9GZZ6 450 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 SMCO4Q9NRQ5 59 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 RASL12Q9NYN1 266 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 PSG11Q9UQ72 335 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ACTL6AO96019 429 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 APOA2P02652 100 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ZBTB25P24278 435 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 Q8IYB0 196 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 C2CD4CQ8TF44 421 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 RGP1Q92546 391 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-203ENST00000378169 LPAR5Q9H1C0 372 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 TRIM64BA6NI03 449 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 A8MXE2 369 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 IGF2P01344 180 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 RFPL3SP0C7P2 107 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 FBXW9Q5XUX1 488 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 UNQ9370/PRO34162Q6UXP9 181 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 NR2C2APQ86WQ0 139 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ADGRG7Q96K78 797 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 OR2J1Q9GZK6 312 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 RHOFQ9HBH0 211 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 VSIG4Q9Y279 399 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 ABCA1O95477 2261 aa11.53□□□□□ -0.56
NPHP4-203ENST00000378169 MYLKQ15746 1914 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 AQP7O14520 342 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 DHODHQ02127 395 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 SLC25A42Q86VD7 318 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 PIK3IP1Q96FE7 263 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.56
NPHP4-203ENST00000378169 KPTNQ9Y664 436 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 CADP27708 2225 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 TSC2P49815 1807 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 LOC101059948A0A1B0GTJ6 334 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 HMSDA8MTL9 139 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 HMGB3O15347 200 aaKnown RBP11.52□□□□□ -0.56
NPHP4-203ENST00000378169 PSMB3P49720 205 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 TLE1Q04724 770 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 RBMXL3Q8N7X1 1067 aaKnown RBP11.52□□□□□ -0.56
NPHP4-203ENST00000378169 LFNGQ8NES3 379 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.56
NPHP4-203ENST00000378169 TRBV5-7A0A0A0MS05 114 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 SP9P0CG40 484 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF250P15622 560 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF239Q16600 458 aaKnown RBP11.52□□□□□ -0.57
NPHP4-203ENST00000378169 SNAI3Q3KNW1 292 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 MDP1Q86V88 176 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 C1orf87Q8N0U7 546 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 OR5C1Q8NGR4 320 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.57
NPHP4-203ENST00000378169 BOD1Q96IK1 185 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 SHARPINQ9H0F6 387 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF355PQ9NSJ1 428 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 SHANK1Q9Y566 2161 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 PPYP01298 95 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 ACKR3P25106 362 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 LGALS4P56470 323 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 TMEM33P57088 247 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 HTD2P86397 168 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 HMGN3Q15651 99 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 CLEC12BQ2HXU8 276 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 STPG1Q5TH74 334 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 PRSS54Q6PEW0 395 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 CCL17Q92583 94 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 MRPL24Q96A35 216 aaKnown RBP11.52□□□□□ -0.57
NPHP4-203ENST00000378169 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms