RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 ISLRO14498 428 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 GYG2O15488 501 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SHOX2O60902 331 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 MYO1DO94832 1006 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 FSTL3O95633 263 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 LDOC1O95751 146 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 HTR2BP41595 481 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 RAB25P57735 213 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TSPAN5P62079 268 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TMED1Q13445 227 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TRIP13Q15645 432 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 PSG3Q16557 428 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 Q499Y3 187 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TTMPQ5BVD1 217 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 CLEC12AQ5QGZ9 265 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TPGS1Q6ZTW0 290 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SPICQ8N5J4 248 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TMEM239Q8WW34 195 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 IFT81Q8WYA0 676 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 OR5P2Q8WZ92 322 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 CCL17Q92583 94 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 YPEL4Q96NS1 127 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 LINC01587Q99440 93 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 ANAPC13Q9BS18 74 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 PLA2G12AQ9BZM1 189 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 ULBP1Q9BZM6 244 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SLC25A31Q9H0C2 315 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 GOLPH3Q9H4A6 298 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 ZNF492Q9P255 531 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SEC16AO15027 2179 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 ADGRL1O94910 1474 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 IGLL5B9A064 214 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 K7EPK0 472 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 K7ERQ8 282 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 YKT6O15498 198 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SLC37A4O43826 429 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SOD3P08294 240 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 LGALS7P47929 136 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 AQP5P55064 265 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 FLI1Q01543 452 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 IGFBP7Q16270 282 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 LDLRAD2Q5SZI1 272 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 ERICH5Q6P6B1 374 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 CLEC18BQ6UXF7 455 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 NT5DC3Q86UY8 548 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 LINC00304Q8N9R0 145 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 OR4C13Q8NGP0 309 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 OR2Y1Q8NGV0 311 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 OR8S1Q8NH09 359 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TWIST2Q8WVJ9 160 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 APOL4Q9BPW4 351 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 TREM1Q9NP99 234 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 MAT2BQ9NZL9 334 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 VWA8A3KMH1 1905 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 BAZ1BQ9UIG0 1483 aaKnown RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 NRCAMQ92823 1304 aa1.05□□□□□ -2.24
VPS13A-206ENST00000376646 COL5A1P20908 1838 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-206ENST00000376646 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 IGKV1OR2-108A0A075B7D4 117 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 F8VP50 259 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 M0QXV9 152 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CDIPTO14735 213 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 IGHG2P01859 326 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 SCGB1C2P0DMR2 95 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 PRTN3P24158 256 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 S100A2P29034 98 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 GTF2H1P32780 548 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 RPA3P35244 121 aaPredicted RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 GCLMP48507 274 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 KCNJ3P48549 501 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TTPAP49638 278 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 KLF3P57682 345 aaPredicted RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 KRTAP12-4P60329 112 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 BAMBIQ13145 260 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TPBGQ13641 420 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 BSXQ3C1V8 233 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 COPS6Q7L5N1 327 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 LRRC6Q86X45 466 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CALHM3Q86XJ0 350 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 C10orf107Q8IVU9 208 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 AMN1Q8IY45 258 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OR4K17Q8NGC6 315 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 SCGB1C1Q8TD33 95 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 C2orf15Q8WU43 125 aaKnown RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 OR2V2Q96R30 315 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TSGA10Q9BZW7 698 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TAS2R13Q9NYV9 303 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 C14orf166Q9Y224 244 aaKnown RBP1.04□□□□□ -2.24
VPS13A-206ENST00000376646 USH1CQ9Y6N9 552 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 NOS1P29475 1434 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TRAV8-3A0A0A6YYJ7 113 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 MYBPHLA2RUH7 354 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 PGPA6NDG6 321 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CD300LBA8K4G0 201 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 PLPP3O14495 311 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 ENTPD6O75354 484 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 KLHL2O95198 593 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 TRGV3P03979 118 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 CECR9P0C854 216 aa1.04□□□□□ -2.24
VPS13A-206ENST00000376646 ZNF35P13682 527 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms