RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FUT3P21217 361 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 CLDN15P56746 228 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 RBM11P57052 281 aaKnown RBP12.05□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF92Q03936 586 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 TMEM187Q14656 261 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 SRSF7Q16629 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCL-203ENST00000374490 PABPC1L2AQ5JQF8 200 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 Q6ZS49 121 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 Q8NFD4 153 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-203ENST00000374490 MOB3AQ96BX8 217 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 SEC11CQ9BY50 192 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 OR2S2Q9NQN1 319 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 PURGQ9UJV8 347 aaKnown RBP12.05□□□□□ -0.48
HMGCL-203ENST00000374490 ST3GAL6Q9Y274 331 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
HMGCL-203ENST00000374490 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 STARD10Q9Y365 291 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 CELSR3Q9NYQ7 3312 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 KIAA1549Q9HCM3 1950 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 IGKV1-12A0A0C4DH73 117 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MSTNO14793 375 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 SNAPINO95295 136 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PLATP00750 562 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 IGKV1D-12P01611 117 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 HERV-K104P61576 105 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 FOXO1Q12778 655 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 LIAT1Q6ZQX7 453 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PIGCQ92535 297 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MRPL24Q96A35 216 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MICU1Q9BPX6 476 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 TREM1Q9NP99 234 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PARP11Q9NR21 331 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 DEPPQ9NTK1 212 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 BORCS7-ASMTA0A0B4J1R7 106 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 F8W036 122 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 MASP2O00187 686 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 GEMIN2O14893 280 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 SYNGR4O95473 234 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 ACTL6AO96019 429 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PRB1P04280 392 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 CD82P27701 267 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 FCGR2CP31995 323 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 CAV2P51636 162 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 IL13RA2Q14627 380 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 RPL7L1Q6DKI1 246 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 RSRP1Q9BUV0 290 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 RNF122Q9H9V4 155 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 NDRG3Q9UGV2 375 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
HMGCL-203ENST00000374490 PTPRBP23467 1997 aa12.04□□□□□ -0.48
HMGCL-203ENST00000374490 ITPR1Q14643 2758 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 GPR137BO60478 399 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 MED6O75586 246 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 PATE4P0C8F1 98 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 EDN3P14138 238 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 DUSP1P28562 367 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 OPRM1P35372 400 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 RRADP55042 308 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 PIGYQ3MUY2 71 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 PSMF1Q92530 271 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
HMGCL-203ENST00000374490 IP6K3Q96PC2 410 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 FBXL17Q9UF56 701 aa12.03□□□□□ -0.48
HMGCL-203ENST00000374490 PINLYPA6NC86 204 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 FAM74A7A6NL05 159 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF587BE7ETH6 402 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 OR5AC1P0C628 307 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 P2RY1P47900 373 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 F2RL1P55085 397 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 FLI1Q01543 452 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-203ENST00000374490 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 TSPO2Q5TGU0 170 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 DPPA2Q7Z7J5 298 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 FOXRED2Q8IWF2 684 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 PUSL1Q8N0Z8 303 aaKnown RBP12.02□□□□□ -0.49
HMGCL-203ENST00000374490 ZNF611Q8N823 705 aa12.02□□□□□ -0.49
HMGCL-203ENST00000374490 BOLLQ8N9W6 283 aaKnown RBP12.02□□□□□ -0.49
HMGCL-203ENST00000374490 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms