RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
USP49-201ENST00000373006 TUBG1P23258 451 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 DUSP1P28562 367 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 CLDN17P56750 224 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP49-201ENST00000373006 FAM69BQ5VUD6 431 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 NTNG2Q96CW9 530 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
USP49-201ENST00000373006 A6NNC1 897 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 DHRS3O75911 302 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 LMO1P25800 156 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 ATP6V0CP27449 155 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 ECI1P42126 302 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 DLK1P80370 383 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 ELOBQ15370 118 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 ZNF587BE7ETH6 402 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 GRB2P62993 217 aaKnown RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 GNMTQ14749 295 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 SLC22A25Q6T423 547 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 SLC35G3Q8N808 338 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 MVB12AQ96EY5 273 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 Q96M66 194 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BKO60814 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BJP06899 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BOP23527 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BBP33778 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 ALDH3B1P43353 468 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BDP58876 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BCP62807 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 CFHR1Q03591 330 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST2H2BEQ16778 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 CYB561D1Q8N8Q1 229 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 OR10G3Q8NGC4 313 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BHQ93079 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 MSI2Q96DH6 328 aaKnown RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 C18orf12Q96KH6 178 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 PACRGQ96M98 296 aaPredicted RBP11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BNQ99877 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 HIST1H2BMQ99879 126 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 GPR27Q9NS67 375 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 DECR2Q9NUI1 292 aa11.91□□□□□ -0.5
USP49-201ENST00000373006 SMCO3A2RU48 225 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 PNLIPP16233 465 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 PLPPR5Q32ZL2 321 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 NKAIN1Q4KMZ8 207 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 PHYHD1Q5SRE7 291 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 C5orf24Q7Z6I8 188 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 ZNF429Q86V71 674 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 CPNE4Q96A23 557 aaPredicted RBP11.9□□□□□ -0.5
USP49-201ENST00000373006 TP53RKQ96S44 253 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 METTL7AQ9H8H3 244 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 SLC7A11Q9UPY5 501 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 IGHV3-15A0A0B4J1V0 119 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 HSD17B6O14756 317 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 CST7O76096 145 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 MAS1LP35410 378 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 CCR5P51681 352 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 RUNX1Q01196 453 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 PIGYQ3MUY2 71 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 SIRT7Q9NRC8 400 aa11.9□□□□□ -0.5
USP49-201ENST00000373006 TRBV11-1A0A0K0K1C0 115 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 A0A1B0GX78 115 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 NKX2-6A6NCS4 301 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 ZNF724A8MTY0 619 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 IL13RA2Q14627 380 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 HIKESHIQ53FT3 197 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 LGI3Q8N145 548 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 GALNT14Q96FL9 552 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 RBM24Q9BX46 236 aaKnown RBP11.89□□□□□ -0.51
USP49-201ENST00000373006 CBLN4Q9NTU7 201 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 IGSF23A1L1A6 192 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 IFNA10P01566 189 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 PKIAP61925 76 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 PPA1Q15181 289 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 FBXL14Q8N1E6 418 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 CDCA3Q99618 268 aaPredicted RBP11.89□□□□□ -0.51
USP49-201ENST00000373006 FGF21Q9NSA1 209 aa11.89□□□□□ -0.51
USP49-201ENST00000373006 SRP19P09132 144 aaKnown RBP11.89□□□□□ -0.51
USP49-201ENST00000373006 PP6455Q8WZ26 134 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms