RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IL3RAP26951 378 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CALCRP30988 508 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GABRA6Q16445 453 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 LTC4SQ16873 150 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 MICBQ29980 383 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 KRTCAP3Q53RY4 240 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM108Q6UXF1 575 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TIPARPQ7Z3E1 657 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SHISA5Q8N114 240 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 LFNGQ8NES3 379 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 OR4A16Q8NH70 328 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CNTNAP3Q9BZ76 1288 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 NAA60Q9H7X0 242 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CA10Q9NS85 328 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TRAV20A0A0B4J274 112 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GDF9O60383 454 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CLDN1O95832 211 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RFPL3SP0C7P2 107 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 EDN3P14138 238 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RPA2P15927 270 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 OMGP23515 440 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZBTB25P24278 435 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 F2RL1P55085 397 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 UCNP55089 124 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 KLF3P57682 345 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 DEFA6Q01524 100 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ENDOGQ14249 297 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TGIF1Q15583 401 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CEACAM21Q3KPI0 293 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 HIKESHIQ53FT3 197 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GPR157Q5UAW9 335 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 H2BFWTQ7Z2G1 175 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 MDP1Q86V88 176 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 MITD1Q8WV92 249 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 AQP3Q92482 292 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 MSI2Q96DH6 328 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GNPNAT1Q96EK6 184 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 NPAS1Q99742 590 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SOSTQ9BQB4 213 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF649Q9BS31 505 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 HIPK2Q9H2X6 1198 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 OPN4Q9UHM6 478 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 STARD10Q9Y365 291 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SVILO95425 2214 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TRGV8A0A0C4DH27 118 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RPS10-NUDT3A0A1W2PQS6 291 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM14DPA8MWL7 114 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 C17orf112F2Z3M2 114 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 MASP2O00187 686 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SLC33A1O00400 549 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GEMIN2O14893 280 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 EFSO43281 561 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RAMP1O60894 148 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 NGFP01138 241 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ALDH3B1P43353 468 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RPS10P46783 165 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GPR12P47775 334 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF83P51522 516 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 S100A12P80511 92 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF92Q03936 586 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF674Q2M3X9 581 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 IGSF11Q5DX21 431 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF468Q5VIY5 522 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 PEAR1Q5VY43 1037 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ADAM5Q6NVV9 412 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SUMF1Q8NBK3 374 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 PHYHIPLQ96FC7 376 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 KCNIP2Q9NS61 270 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZMAT5Q9UDW3 170 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 AK3Q9UIJ7 227 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 KLK13Q9UKR3 277 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 HSF4Q9ULV5 492 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SPTA1P02549 2419 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 IGKV1D-43A0A0B4J1Z2 117 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 A0A1W2PR80 420 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TRDCB7Z8K6 153 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TRIM77I1YAP6 450 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SIGLEC5O15389 551 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 GLI4P10075 376 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CEACAM1P13688 526 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 ZNF708P17019 499 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RAB13P51153 203 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RBM11P57052 281 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RAB11AP62491 216 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 IL13RA2Q14627 380 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 OVCH2Q7RTZ1 564 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 SAXO1Q8IYX7 474 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CISD2Q8N5K1 135 aaKnown RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TMEM104Q8NE00 496 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 OR2Z1Q8NG97 314 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 FBXO17Q96EF6 278 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 CIB3Q96Q77 187 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 TMPRSS13Q9BYE2 586 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 NMES1Q9C002 83 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 WDR13Q9H1Z4 485 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 NPDC1Q9NQX5 325 aaPredicted RBP4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 PPP1R3CQ9UQK1 317 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 KCNK7Q9Y2U2 307 aa4.63□□□□□ -1.67
SMNDC1-202ENST00000369603 RAB19A4D1S5 217 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms