RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RNF122Q9H9V4 155 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 PNRC2Q9NPJ4 139 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 SH3BGRL2Q9UJC5 107 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 MRPS28Q9Y2Q9 187 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 TCAPO15273 167 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 SOX15O60248 233 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 CYTIPO60759 359 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 SERPINA5P05154 406 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 RCC1P18754 421 aaPredicted RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 PI3P19957 117 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 AGTR1P30556 359 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 NDUFA6P56556 154 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 TAS2R60P59551 318 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 RIPPLY1Q0D2K3 151 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 MPPED2Q15777 294 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 MST1LQ2TV78 715 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 SNAI3Q3KNW1 292 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ABLIM2Q6H8Q1 611 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 DHRS11Q6UWP2 260 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ACOT7LQ6ZUV0 252 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 SLC16A14Q7RTX9 510 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 P4HA3Q7Z4N8 544 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ZNF100Q8IYN0 542 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 OR10D4PQ8NGN7 298 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 MARCH1Q8TCQ1 289 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 PGAM5Q96HS1 289 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 PHB2Q99623 299 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 PRDM13Q9H4Q3 707 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 FN3KRPQ9HA64 309 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 A0A1W2PP11 408 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 A0A1W2PPE2 198 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ZNF503-AS2A6NEH8 195 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 DBX1A6NMT0 343 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 RNASEK-C17orf49H0YIS7 233 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ZNF735P0CB33 412 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 CD79AP11912 226 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ARF1P84077 181 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 ZNF260Q3ZCT1 412 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 GFI1BQ5VTD9 330 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ZNF585AQ6P3V2 769 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 PAQR4Q8N4S7 273 aaPredicted RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 INO80EQ8NBZ0 244 aaPredicted RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 ADAD2Q8NCV1 583 aaKnown RBP9.25□□□□□ -0.93
TPM3-212ENST00000368533 BHLHE23Q8NDY6 225 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 OR4K15Q8NH41 348 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 RAB3CQ96E17 227 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 ST6GALNAC5Q9BVH7 336 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 GPR35Q9HC97 309 aa9.25□□□□□ -0.93
TPM3-212ENST00000368533 OR3A4PP47883 348 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 PCP4P48539 62 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 NPY4RP50391 375 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 TMEM104Q8NE00 496 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 OR5M8Q8NGP6 311 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 POLEQ07864 2286 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 A0A087X0M5 115 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 A0A0A6YYH2 397 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 A0A1B0GX30 115 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 A6NJ64 397 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 SLC22A20A6NK97 555 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 LDLRAD4O15165 306 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 SOCS1O15524 211 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 OR2F2O95006 317 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 FOLR2P14207 255 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 RAB5AP20339 215 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 PJVKQ0ZLH3 352 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 OR2F1Q13607 317 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 SLC9A3R2Q15599 337 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 PCK2Q16822 640 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 HIKESHIQ53FT3 197 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 MAFIPQ8WZ33 124 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 AQP3Q92482 292 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 TMEM38BQ9NVV0 291 aa9.24□□□□□ -0.93
TPM3-212ENST00000368533 LOC102725191A0A1B0GVB3 256 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 C9orf170A2RU37 121 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 WIPF3A6NGB9 483 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 BPNT1O95861 308 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 IFNA2P01563 188 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 SFTPCP11686 197 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 RAB6AP20340 208 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 RSPO1Q2MKA7 263 aaPredicted RBP9.23□□□□□ -0.93
TPM3-212ENST00000368533 AWAT1Q58HT5 328 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 FAM76BQ5HYJ3 339 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 C15orf54Q8N8G6 183 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 SULT4A1Q9BR01 284 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 SF3B5Q9BWJ5 86 aaKnown RBP9.23□□□□□ -0.93
TPM3-212ENST00000368533 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 TRAV17A0A0B4J275 112 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 A0A1B0GV50 99 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 M0R135 149 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 FGF16O43320 207 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 LCATP04180 440 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 CD74P04233 296 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 FAHP16930 419 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 CFPP27918 469 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 OR3A2P47893 321 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 RBP2P50120 134 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms