RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 GLYATL2Q8WU03 294 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 RBMXL1Q96E39 390 aaKnown RBP7.73□□□□□ -1.17
THBS3-201ENST00000368378 PLPPR2Q96GM1 343 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 C1orf147Q96MC9 270 aaPredicted RBP7.73□□□□□ -1.17
THBS3-201ENST00000368378 PRRX2Q99811 253 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 MMP26Q9NRE1 261 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 RCC2Q9P258 522 aaKnown RBP7.73□□□□□ -1.17
THBS3-201ENST00000368378 MEMO1Q9Y316 297 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 A0A1W2PQM1 296 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 C10orf142B7Z368 130 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 HSBP1L1C9JCN9 74 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 MFNGO00587 321 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 IL2RAP01589 272 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 IGHV2-70P01814 119 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 MBPP02686 304 aaPredicted RBP7.73□□□□□ -1.17
THBS3-201ENST00000368378 GLB1P16278 677 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 FPR2P25090 351 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 S100PP25815 95 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 DEFA6Q01524 100 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 OR2B11Q5JQS5 317 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 SPATA46Q5T0L3 261 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 NSUN5P2Q63ZY6 315 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 SLC25A26Q70HW3 274 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 DOK3Q7L591 496 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 DPPA2Q7Z7J5 298 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 C1orf123Q9NWV4 160 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 GHRLQ9UBU3 117 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 NDRG3Q9UGV2 375 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 CEP295Q9C0D2 2601 aa7.73□□□□□ -1.17
THBS3-201ENST00000368378 C7orf77A4D0Y5 90 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 M0R296 226 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CXCL13O43927 109 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SELEP16581 610 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 MSR1P21757 451 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 HERV-K104P61576 105 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CCL20P78556 96 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 C3AR1Q16581 482 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 GUK1Q16774 197 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ACER2Q5QJU3 275 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ZNF529Q6P280 563 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 DTWD2Q8NBA8 298 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 OR14K1Q8NGZ2 314 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 FGFBP3Q8TAT2 258 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 RDH5Q92781 318 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 PTX4Q96A99 478 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SGCZQ96LD1 299 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 OR51M1Q9H341 326 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 KCNJ16Q9NPI9 418 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 KCNIP3Q9Y2W7 256 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 UBE2J1Q9Y385 318 aaPredicted RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 ARFGEF3Q5TH69 2177 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 MED13Q9UHV7 2174 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ADGRG4Q8IZF6 3080 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ADAMTS9Q9P2N4 1935 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SPTA1P02549 2419 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CCDC187A0A096LP49 1063 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 H7C1Q1 480 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ZNF32P17041 273 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 TUBG1P23258 451 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 HGFACQ04756 655 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ZP4Q12836 540 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 EIF4E3Q8N5X7 224 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 PLPP5Q8NEB5 264 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SLC30A7Q8NEW0 376 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ABHD3Q8WU67 409 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CCDC74BQ96LY2 380 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 NMES1Q9C002 83 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 NELFAQ9H3P2 528 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 WFDC1Q9HC57 220 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 MYOZ1Q9NP98 299 aaPredicted RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 SRPK3Q9UPE1 567 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 HEATR1Q9H583 2144 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 DLL1O00548 723 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 LAMTOR5O43504 91 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 PET100P0DJ07 73 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 BMI1P35226 326 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 CXCL12P48061 93 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 AFF3P51826 1226 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 FGF8P55075 233 aaPredicted RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 NDUFA6P56556 154 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ZNF528Q3MIS6 628 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SAPCD1Q5SSQ6 148 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 RPUSD3Q6P087 351 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 ARRDC1Q8N5I2 433 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 TMEM105Q8N8V8 129 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 GJC3Q8NFK1 279 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 ASB13Q8WXK3 278 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 SPACA9Q96E40 222 aaPredicted RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 MRPL13Q9BYD1 178 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 MRPS17Q9Y2R5 130 aaKnown RBP7.72□□□□□ -1.17
THBS3-201ENST00000368378 CEP192Q8TEP8 1941 aa7.72□□□□□ -1.17
THBS3-201ENST00000368378 IGKV1-27A0A075B6S5 117 aa7.71□□□□□ -1.18
THBS3-201ENST00000368378 ZFP92A6NM28 416 aa7.71□□□□□ -1.18
THBS3-201ENST00000368378 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
THBS3-201ENST00000368378 PRF1P14222 555 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms