RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 HSMCR30P0CW71 290 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF44P15621 663 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 PRTN3P24158 256 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 COX7A1P24310 79 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 CRHBPP24387 322 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 PAX6P26367 422 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 IRF3Q14653 427 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 GRK1Q15835 563 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 PIGYQ3MUY2 71 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 TMEM200BQ69YZ2 307 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 FIP1L1Q6UN15 594 aaKnown RBP12.01□□□□□ -0.49
SF3B5-201ENST00000367569 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 TCF23Q7RTU1 214 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 Q8IYB0 196 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF747Q9BV97 191 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 EXOSC4Q9NPD3 245 aaKnown RBP12.01□□□□□ -0.49
SF3B5-201ENST00000367569 TPRKBQ9Y3C4 175 aa12.01□□□□□ -0.49
SF3B5-201ENST00000367569 TRBV23-1A0A0A0MS06 115 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 A0A1W2PP11 408 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 K7N7A8 449 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 GPR37O15354 613 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 PIN1P1O15428 100 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 MAGEB3O15480 346 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
SF3B5-201ENST00000367569 OR2H2O95918 312 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 MAS1P04201 325 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 CHRM2P08172 466 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 SERPINA2P20848 420 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
SF3B5-201ENST00000367569 BDKRB2P30411 391 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 OR3A1P47881 315 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 FOXL1Q12952 345 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 ATXN7L3Q14CW9 347 aaPredicted RBP12□□□□□ -0.49
SF3B5-201ENST00000367569 LIPKQ5VXJ0 399 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 GDPD3Q7L5L3 318 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 OR8H2Q8N162 312 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 KIR3DL3Q8N743 410 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 DERL3Q96Q80 235 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 CDCA4Q9BXL8 241 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 NOX4Q9NPH5 578 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 ING4Q9UNL4 249 aa12□□□□□ -0.49
SF3B5-201ENST00000367569 TRBV5-7A0A0A0MS05 114 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 HTR3BO95264 441 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 IGFBP3P17936 291 aaPredicted RBP11.99□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF93P35789 620 aaPredicted RBP11.99□□□□□ -0.49
SF3B5-201ENST00000367569 BMXP51813 675 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 RPS25P62851 125 aaKnown RBP11.99□□□□□ -0.49
SF3B5-201ENST00000367569 RSU1Q15404 277 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 SPHARQ15513 63 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 SPIN3Q5JUX0 258 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 JAGN1Q8N5M9 183 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 C17orf50Q8WW18 174 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 TMEM203Q969S6 136 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 MUL1Q969V5 352 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 CYYR1Q96J86 154 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 DUSP21Q9H596 190 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 CKLFQ9UBR5 152 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 RAB26Q9ULW5 256 aa11.99□□□□□ -0.49
SF3B5-201ENST00000367569 FAM172BPA6NC97 362 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 M0R1W7 72 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 FSTP19883 344 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 TGFBR2P37173 567 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 ZNF146Q15072 292 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 SLC9A3R2Q15599 337 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 TRAPPC6BQ86SZ2 158 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 SAXO1Q8IYX7 474 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 TNFRSF14Q92956 283 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 SNX22Q96L94 193 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 PPIL3Q9H2H8 161 aaKnown RBP11.98□□□□□ -0.49
SF3B5-201ENST00000367569 KCNK15Q9H427 330 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 TMEM138Q9NPI0 162 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 KIAA2026Q5HYC2 2103 aa11.98□□□□□ -0.49
SF3B5-201ENST00000367569 SLC33A1O00400 549 aaPredicted RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 NPFFO15130 113 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 ALX3O95076 343 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 RNASE1P07998 156 aaKnown RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 MELTFP08582 738 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 SAA4P35542 130 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 DLX6P56179 175 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 AESQ08117 197 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 BLMHQ13867 455 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 C11orf91Q3C1V1 193 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 SLC22A6Q4U2R8 563 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 RBM48Q5RL73 367 aaKnown RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 Q6P435 159 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 ZSCAN4Q8NAM6 433 aaPredicted RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 UFD1Q92890 307 aa11.97□□□□□ -0.49
SF3B5-201ENST00000367569 CPNE2Q96FN4 548 aaPredicted RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 ZMAT3Q9HA38 289 aaKnown RBP11.97□□□□□ -0.49
SF3B5-201ENST00000367569 MEIOCA2RUB1 952 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms