RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SMIM18P0DKX4 95 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 COL19A1Q14993 1142 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 C5orf52A6NGY3 159 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 KIR3DL2P43630 455 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF66Q6ZN08 573 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 SLC25A42Q86VD7 318 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF552Q9H707 407 aaPredicted RBP13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 LPAR2Q9HBW0 351 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 PRNDQ9UKY0 176 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 MMP24Q9Y5R2 645 aa13.89□□□□□ -0.19
NUCKS1-201ENST00000367142 CITO14578 2027 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 A0A1W2PQD3 144 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 IGSF23A1L1A6 192 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 WNT1P04628 370 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 GZMHP20718 246 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 GGNBP1Q5YKI7 109 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 NUP37Q8NFH4 326 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 RASL10BQ96S79 203 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 TGFBR1P36897 503 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 LILRA6Q6PI73 481 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF547Q8IVP9 402 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 LYRM2Q9NU23 88 aaPredicted RBP13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 PRSS44E7EML9 344 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 CD1BP29016 333 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 RIGQ13278 110 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 FAM27D1Q5T7N8 215 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 PRSS41Q7RTY9 318 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF768Q9H5H4 540 aaKnown RBP13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 STARD10Q9Y365 291 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 WSB1Q9Y6I7 421 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 ALX3O95076 343 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 PTBP3O95758 552 aaKnown RBP13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 VDAC1P21796 283 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 CLEC9AQ6UXN8 241 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 GMPPAQ96IJ6 420 aaPredicted RBP13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 MANBALQ9NQG1 85 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 MMP26Q9NRE1 261 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 NDUFB6O95139 128 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 GCSHP23434 173 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 INO80CQ6PI98 192 aaPredicted RBP13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 FAM219AQ8IW50 185 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 TCTEX1D1Q8N7M0 179 aa13.88□□□□□ -0.19
NUCKS1-201ENST00000367142 OR5AC1P0C628 307 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 PMELP40967 661 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 ZFP36L2P47974 494 aaKnown RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■■□ 24.8
NUCKS1-201ENST00000367142 OR8I2Q8N0Y5 310 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 MRPL37Q9BZE1 423 aaKnown RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 EXOGQ9Y2C4 368 aaKnown RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 TMPRSS3P57727 454 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 IQCJQ1A5X6 159 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 C16orf47Q6ZP98 133 aaPredicted RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 OR4C5Q8NGB2 326 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 C10orf35Q96D05 121 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 PCGF1Q9BSM1 259 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 GPR27Q9NS67 375 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 Q6ZN92 141 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 LINC01555Q8NAE3 123 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 ADIPOR1Q96A54 375 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 ZMAT5Q9UDW3 170 aaKnown RBP13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 TCHHQ07283 1943 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 A0A1W2PNV4 684 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 PIPOXQ9P0Z9 390 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 P01737 135 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 ARG1P05089 322 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 HLA-GP17693 338 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 LOXL3P58215 753 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 IL24Q13007 206 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 CEBPEQ15744 281 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 RRN3P1Q2M238 152 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 OR2C3Q8N628 320 aa13.87□□□□□ -0.19
NUCKS1-201ENST00000367142 CCL4P13236 92 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CAMPP49913 170 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 C10orf113Q5VZT2 155 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 SCGB1D4Q6XE38 83 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 OR8B12Q8NGG6 310 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 P2RX4Q99571 388 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 U3KQ87 197 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 MAST2Q6P0Q8 1798 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CLDN34H7C241 214 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CTAG2O75638 210 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 LSM6P62312 80 aaKnown RBP13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF658BQ4V348 819 aaPredicted RBP13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CNTD2Q9H8S5 307 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CBY3A6NI87 242 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 TINAGQ9UJW2 476 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 IGLV3-16A0A075B6K0 115 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 C9orf170A2RU37 121 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 PLPP2O43688 288 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 GALP22466 123 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CTGFP29279 349 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 CDC20Q12834 499 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 D2HGDHQ8N465 521 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 NUP98P52948 1817 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms