RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SFT2D2O95562 160 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 CPN1P15169 458 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 TAGLN2P37802 199 aaKnown RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 OR3A4PP47883 348 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 CXorf67Q86X51 503 aaPredicted RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 BATF2Q8N1L9 274 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 PPP1R1CQ8WVI7 109 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 PINX1Q96BK5 328 aaKnown RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 NTNG2Q96CW9 530 aa6.15□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF385AQ96PM9 386 aaKnown RBP6.15□□□□□ -1.43
RAB5B-201ENST00000360299 hADV38S2A0JD32 116 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF724A8MTY0 619 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 COX5BP10606 129 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 HLA-DOBP13765 273 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PSMB3P49720 205 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TNFAIP6P98066 277 aaPredicted RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 GABRA6Q16445 453 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF239Q16600 458 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 KCNIP4Q6PIL6 250 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 C20orf196Q8IYI0 205 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TMEM217Q8N7C4 229 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 HGDQ93099 445 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 S100PBPQ96BU1 408 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 POM121Q96HA1 1249 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ADTRPQ96IZ2 230 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ATPIF1Q9UII2 106 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PTPRQQ9UMZ3 2332 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 IGLV1-36A0A0B4J1U3 117 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 HRASP01112 189 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PGA4P0DJD7 388 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PTAFRP25105 342 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 KIR2DS2P43631 304 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF468Q5VIY5 522 aaPredicted RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 OR52W1Q6IF63 320 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 FDX2Q6P4F2 183 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 WNT2BQ93097 391 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 GAL3ST2Q9H3Q3 398 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 NCOR2Q9Y618 2525 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TRBV5-5A0A0J9YX44 114 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 CNIH1O95406 144 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 CTSDP07339 412 aaPredicted RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 H2AFB1P0C5Y9 115 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 SULT1A3P0DMM9 295 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 SULT1A4P0DMN0 295 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TSPO2Q5TGU0 170 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 SLC7A5P1Q8MH63 180 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 APCDD1LQ8NCL9 501 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 DAZAP1Q96EP5 407 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 DHRS9Q9BPW9 319 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 NUDT16L1Q9BRJ7 211 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PECRQ9BY49 303 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 MS4A7Q9GZW8 240 aaPredicted RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 FAM234AQ9H0X4 552 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TRAV38-1A0A0B4J264 116 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 A0A1W2PRD5 423 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 A0A1W2PRF3 423 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 A0A1W2PRM7 423 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TMEM229AB2RXF0 380 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 GMDSO60547 372 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 UMODP07911 640 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PATE4P0C8F1 98 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 PI3P19957 117 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 GZMHP20718 246 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 RPS4XP62701 263 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 RBPMSQ93062 196 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 NIPSNAP3BQ9BS92 247 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 FAAP24Q9BTP7 215 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ARV1Q9H2C2 271 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 MS4A5Q9H3V2 200 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ANXA10Q9UJ72 324 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 TUBD1Q9UJT1 453 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 KPTNQ9Y664 436 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 V9GYH0 126 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 CREBBPQ92793 2442 aa6.14□□□□□ -1.43
RAB5B-201ENST00000360299 INTS1Q8N201 2190 aaKnown RBP6.14□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF106Q9H2Y7 1883 aaKnown RBP6.13□□□□□ -1.43
RAB5B-201ENST00000360299 UMAD1C9J7I0 102 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 MS4A18H0YCH9 400 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 J3QW42 95 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 KLF4O43474 513 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 CYTIPO60759 359 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 CRHP06850 196 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 DEFA4P12838 97 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 CCL2P13500 99 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 DHRS2Q13268 280 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 MS4A18Q3C1V0 323 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 CST9LP1Q5W188 147 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 C17orf82Q86X59 251 aaPredicted RBP6.13□□□□□ -1.43
RAB5B-201ENST00000360299 KCNRGQ8N5I3 272 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 ZNF519Q8TB69 540 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 LRRC29Q8WV35 223 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 RAB40CQ96S21 281 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 MIXL1Q9H2W2 232 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
RAB5B-201ENST00000360299 SMLR1H3BR10 107 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms