RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 HRASLSQ9HDD0 168 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
PDLIM5-203ENST00000359265 hCG_1807616A0A1W2PRN6 198 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 F8VVB4 439 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 F8VWA3 439 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 SPRY3O43610 288 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 SSX5O60225 188 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 NOS1APO75052 506 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 NXPH2O95156 264 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 GOSR1O95249 250 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 MT-ND4P03905 459 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 IGFBP2P18065 325 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 SLC6A1P30531 599 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 PMELP40967 661 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 KRTAP10-9P60411 292 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 MRPS15P82914 257 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 TNFAIP6P98066 277 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 ATAD3CQ5T2N8 411 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 PLET1Q6UQ28 207 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 WDR82Q6UXN9 313 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 DUSP18Q8NEJ0 188 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 MEGF10Q96KG7 1140 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 OR2V2Q96R30 315 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 FN3KRPQ9HA64 309 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 FAIMQ9NVQ4 179 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 NLKQ9UBE8 527 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
PDLIM5-203ENST00000359265 PKDREJQ9NTG1 2253 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 IGHV3-64DA0A0J9YX35 117 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 DEFB108AA8MXU0 73 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 E7EQL1 145 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 M0R233 179 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 ADH4P08319 380 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 TBPP20226 339 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 BTCP35070 178 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 SERPINF1P36955 418 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 EFNB3Q15768 340 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 MPPED2Q15777 294 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 SPIN3Q5JUX0 258 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 STEAP1BQ6NZ63 245 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF826PQ6ZT77 177 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 C11orf53Q8IXP5 236 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 OR4C16Q8NGL9 310 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 ITLN1Q8WWA0 313 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 CMSS1Q9BQ75 279 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 SULT4A1Q9BR01 284 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 OCSTAMPQ9BR26 566 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 RCC2Q9P258 522 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 AK3Q9UIJ7 227 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 PLEKHA6Q9Y2H5 1048 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 DYSFO75923 2080 aa11.7□□□□□ -0.54
PDLIM5-203ENST00000359265 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 C17orf100A8MU93 164 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 SIAH2O43255 324 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 RAB3DO95716 219 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 CD3DP04234 171 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 FCER2P06734 321 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 CD55P08174 381 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 NAT1P18440 290 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 GLRA1P23415 457 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 GIFP27352 417 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 APOBEC3AP31941 199 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 GATA4P43694 442 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 MEF2DQ14814 521 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 SMIM21Q3B7S5 101 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 PLA1AQ53H76 456 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 RSBN1Q5VWQ0 802 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 LRRC29Q8WV35 223 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 DHRS9Q9BPW9 319 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 FAAP24Q9BTP7 215 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 CACNG6Q9BXT2 260 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 CHST6Q9GZX3 395 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 MMP28Q9H239 520 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 IFT22Q9H7X7 185 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 DYNLRB1Q9NP97 96 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF701Q9NV72 531 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 GLS2Q9UI32 602 aa11.69□□□□□ -0.54
PDLIM5-203ENST00000359265 UBE2QL1A1L167 161 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 B9A039 149 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 MCRIP1C9JLW8 97 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 C19orf84I3L1E1 186 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms